RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ART1P52961 327 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 RAC3P60763 192 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 RPS18P62269 152 aaKnown RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 FMODQ06828 376 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 Q0VFX4 171 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 OR7E24Q6IFN5 339 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 GLRX5Q86SX6 157 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF227Q86WZ6 799 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 OR5M1Q8NGP8 315 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 JSRP1Q96MG2 331 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 NEDD4LQ96PU5 975 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 GFI1Q99684 422 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 EMC6Q9BV81 110 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 TMEM185BQ9H7F4 350 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 MOB1AQ9H8S9 216 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF275Q9NSD4 429 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 STEAP1Q9UHE8 339 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 OR52A1Q9UKL2 312 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 HMX3A6NHT5 357 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 MPZL1O95297 269 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 CD37P11049 281 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 KIR2DL3P43628 341 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 CAMK2DQ13557 499 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 GLT8D1Q68CQ7 371 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 LGALS14Q8TCE9 139 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 FOXRED1Q96CU9 486 aaPredicted RBP13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 SLAMF6Q96DU3 332 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 FOXN4Q96NZ1 517 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 ABHD1Q96SE0 405 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 LIN7BQ9HAP6 207 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 SLC17A5Q9NRA2 495 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 STMN3Q9NZ72 180 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
ECHDC1-220ENST00000528402 A0A1B0GTH9 108 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 TMEM269A0A1B0GVZ9 245 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 MEIOCA2RUB1 952 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 NPIPA2E9PIF3 369 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 NPIPA3F8WFD2 350 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 BOLA2-SMG1P6H3BVE0 249 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 ORC5O43913 435 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 LRP3O75074 770 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 ECDO95905 644 aaPredicted RBP13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 PNPP00491 289 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 CD82P27701 267 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 DYRK1AQ13627 763 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 TOMM20Q15388 145 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 C10orf128Q5T292 105 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 PDSS1Q5T2R2 415 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 HES5Q5TA89 166 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 FCRLAQ7L513 359 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 CDH24Q86UP0 819 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 CMTM4Q8IZR5 234 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 TOMM5Q8N4H5 51 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 ASB5Q8WWX0 329 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 DEDD2Q8WXF8 326 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 TMEM54Q969K7 222 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 HAVCR1Q96D42 359 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 PLEKHA1Q9HB21 404 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 G6PC2Q9NQR9 355 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 ANKRD10Q9NXR5 420 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 GLTPQ9NZD2 209 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 KMT2EQ8IZD2 1858 aa13.14□□□□□ -0.31
ECHDC1-220ENST00000528402 IGKV1D-43A0A0B4J1Z2 117 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 A0A1W2PPL8 197 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 STMND1H3BQB6 276 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 RAD1O60671 282 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 OPN1LWP04000 364 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 QDPRP09417 244 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 FAM157BP0CG42 384 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ADRA2CP18825 462 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 TCEA1P23193 301 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 EIF2B2P49770 351 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SUCLG1P53597 346 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CLDN17P56750 224 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CLDN20P56880 219 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 AP3S2P59780 193 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 BTG1P62324 171 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 FOXK1P85037 733 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ZNF468Q5VIY5 522 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ABHD17BQ5VST6 288 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 LRFN4Q6PJG9 635 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ESPNLQ6ZVH7 1005 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SPATC1Q76KD6 591 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 PSMF1Q92530 271 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CREB3L1Q96BA8 519 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms