RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 C12orf71A8MTZ7 269 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 IMPA2O14732 288 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 SLC16A7O60669 478 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 PTP4A3O75365 173 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 PPP1R3DO95685 299 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 FAM107AO95990 144 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 CTLA4P16410 223 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 ENDOGQ14249 297 aaKnown RBP13.32□□□□□ -0.28
CAPN1-213ENST00000527897 GPR139Q6DWJ6 353 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 SMARCD3Q6STE5 483 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 ZER1Q7Z7L7 766 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF786Q8N393 782 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 SNX33Q8WV41 574 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 POM121L2Q96KW2 1035 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 ERMAPQ96PL5 475 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-213ENST00000527897 NRIP3Q9NQ35 241 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 GPR160Q9UJ42 338 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 HPXP02790 462 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 ATP6V1B2P21281 511 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 GCH1P30793 250 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 WNT5AP41221 380 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 GZMKP49863 264 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 FXYD6P3P58550 94 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 DPY19L2P2Q6ZN68 376 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 RINLQ6ZS11 566 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 FOXL2NBQ6ZUU3 175 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 PTCHD4Q6ZW05 846 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF101Q8IZC7 436 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 ABHD4Q8TB40 342 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 SNX18Q96RF0 628 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 FUZQ9BT04 418 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 CHODLQ9H9P2 273 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 HINT3Q9NQE9 182 aaKnown RBP13.31□□□□□ -0.28
CAPN1-213ENST00000527897 COA3Q9Y2R0 106 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-213ENST00000527897 POLR1DQ9Y2S0 133 aa13.31□□□□□ -0.28
CAPN1-213ENST00000527897 LOC100289279A0A1B0GTE1 492 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 KIAA1324LA8MWY0 1029 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-213ENST00000527897 TPD52L2O43399 206 aaKnown RBP13.3□□□□□ -0.28
CAPN1-213ENST00000527897 AHCYL1O43865 530 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 DOK2O60496 412 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 KHDRBS3O75525 346 aaKnown RBP13.3□□□□□ -0.28
CAPN1-213ENST00000527897 MPZL1O95297 269 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF250P15622 560 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF23P17027 643 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 COL8A2P25067 703 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 SLC6A6P31641 620 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 IFNGR2P38484 337 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 MAGEB1P43366 347 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 HTR5AP47898 357 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 CCL8P80075 99 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF718Q3SXZ3 478 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 SPATS1Q496A3 300 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 ELFN2Q5R3F8 820 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 UNQ6126/PRO20091Q6UXV3 157 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 ADCK1Q86TW2 530 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 JAZF1Q86VZ6 243 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 GLB1L2Q8IW92 636 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 GTF3AQ92664 365 aaKnown RBP13.3□□□□□ -0.28
CAPN1-213ENST00000527897 SAMD8Q96LT4 415 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 GPX7Q96SL4 187 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-213ENST00000527897 IFT27Q9BW83 186 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 NARFLQ9H6Q4 476 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 SLCO1C1Q9NYB5 712 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 MALRD1Q5VYJ5 2156 aa13.3□□□□□ -0.28
CAPN1-213ENST00000527897 TNFRSF11BO00300 401 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 SGCEO43556 437 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 NCR1O76036 304 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 ABHD16AO95870 558 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 GPANK1O95872 356 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 MT-ND5P03915 603 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 CALB2P22676 271 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 GIFP27352 417 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 NOS3P29474 1203 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 MPV17P39210 176 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 CDKN2AP42771 156 aaKnown RBP13.29□□□□□ -0.28
CAPN1-213ENST00000527897 SCRN3Q0VDG4 424 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 PPP1R8Q12972 351 aaKnown RBP13.29□□□□□ -0.28
CAPN1-213ENST00000527897 CCNIQ14094 377 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 TRIP10Q15642 601 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 RFX4Q33E94 735 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 CHRFAM7AQ494W8 412 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 LEG1Q6P5S2 330 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 RFPL4BQ6ZWI9 263 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 DHFR2Q86XF0 187 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 SLC25A40Q8TBP6 338 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 GNPDA2Q8TDQ7 276 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 IPCEF1Q8WWN9 437 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-213ENST00000527897 CCDC124Q96CT7 223 aaKnown RBP13.29□□□□□ -0.28
CAPN1-213ENST00000527897 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
CAPN1-213ENST00000527897 OR2J1Q9GZK6 312 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 NUAK2Q9H093 628 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 PLEK2Q9NYT0 353 aa13.29□□□□□ -0.28
CAPN1-213ENST00000527897 VSX1Q9NZR4 365 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms