RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 RFPL4BQ6ZWI9 263 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 PIGWQ7Z7B1 504 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CYP4Z1Q86W10 505 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 OR52J3Q8NH60 311 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CLDND2Q8NHS1 167 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC25A40Q8TBP6 338 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 FNDC8Q8TC99 324 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 RASD2Q96D21 266 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 MARS2Q96GW9 593 aaKnown RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 LRMDAQ9H2I8 198 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 KCNN2Q9H2S1 579 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 NARFLQ9H6Q4 476 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 GORASP2Q9H8Y8 452 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 NRIP3Q9NQ35 241 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 LPAR3Q9UBY5 353 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 IL20RAQ9UHF4 553 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 TIMM10BQ9Y5J6 103 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CACNG2Q9Y698 323 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 V9GYQ6 96 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 SVEP1Q4LDE5 3571 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 TEX13CA0A0J9YWL9 993 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 PRSS37A4D1T9 235 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 RNF212BA8MTL3 300 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 CDC14BO60729 498 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 NDUFB2O95178 105 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 MPZL1O95297 269 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 IGHV3-13P01766 116 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 NR2C1P13056 603 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 HSD17B1P14061 328 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 ACHEP22303 614 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 RBMXP38159 391 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 GDI2P50395 445 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 MMP15P51511 669 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 TMEM33P57088 247 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 LMO4P61968 165 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 GNGT1P63211 74 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 CCL8P80075 99 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 MRPS11P82912 194 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 CR1LQ2VPA4 569 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 SPRNQ5BIV9 151 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 FGD3Q5JSP0 725 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 PTCHD4Q6ZW05 846 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 RRM2BQ7LG56 351 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 CPLX4Q7Z7G2 160 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 ZER1Q7Z7L7 766 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 PHC2Q8IXK0 858 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 LINC01356Q8N9X3 169 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 SPATA3Q8NHX4 192 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 KLF14Q8TD94 323 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 IPCEF1Q8WWN9 437 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 PYURFQ96I23 114 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 RSRC1Q96IZ7 334 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 GPX7Q96SL4 187 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 OR2J1Q9GZK6 312 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 POFUT1Q9H488 388 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 SLCO1C1Q9NYB5 712 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 TREM2Q9NZC2 230 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 GRHPRQ9UBQ7 328 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 TMEM5Q9Y2B1 443 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 FAM32AQ9Y421 112 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 IER3IP1Q9Y5U9 82 aa8.89□□□□□ -0.99
PRPF40B-204ENST00000527253 UNC119BA6NIH7 251 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 ZSCAN5BA6NJL1 495 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 PPIHO43447 177 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 SLC16A7O60669 478 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 ICMTO60725 284 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 GPANK1O95872 356 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 TXNDC12O95881 172 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 IGHV1-46P01743 117 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 SRD5A1P18405 259 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 CDKN2AP42771 156 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 CRYBB2P43320 205 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 SELENOVP59797 346 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 KRR1Q13601 381 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 TSTQ16762 297 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 ZNF718Q3SXZ3 478 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 AVPI1Q5T686 147 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 MBNL2Q5VZF2 373 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 TMEM154Q6P9G4 183 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 PGAM4Q8N0Y7 254 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 ABHD4Q8TB40 342 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 ZNF570Q96NI8 536 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 SYT4Q9H2B2 425 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 NKIRAS2Q9NYR9 191 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 VSX1Q9NZR4 365 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 EIF3KQ9UBQ5 218 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 TAGLN3Q9UI15 199 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 KLHL21Q9UJP4 597 aa8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 SAMD4AQ9UPU9 718 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 COA3Q9Y2R0 106 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-204ENST00000527253 C12orf71A8MTZ7 269 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 DCTN6O00399 190 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 SOCS2O14508 198 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 XKRYO14609 159 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 ARPC2O15144 300 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 SPRY3O43610 288 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 AHCYL1O43865 530 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 KHDRBS3O75525 346 aaKnown RBP8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 SDHAP31040 664 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms