RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ROR2Q01974 943 aaKnown RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 TOP3AQ13472 1001 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 DAG1Q14118 895 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 GGTLC2Q14390 218 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 GINS1Q14691 196 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 PTGES3Q15185 160 aaKnown RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 TAB1Q15750 504 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 C10orf128Q5T292 105 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 C9orf135Q5VTT2 229 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 GPR139Q6DWJ6 353 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 SHISA2Q6UWI4 295 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 FOXL2NBQ6ZUU3 175 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 ZNF771Q7L3S4 317 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 ATG16L2Q8NAA4 619 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 OR4K13Q8NH42 304 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 FANK1Q8TC84 345 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 MAGEE2Q8TD90 523 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 HTRA1Q92743 480 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 PTP4A1Q93096 173 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 ZNF566Q969W8 418 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 ZNF75AQ96N20 296 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 ALKBH3Q96Q83 286 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 NMNAT3Q96T66 252 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 IFT27Q9BW83 186 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 NMNAT2Q9BZQ4 307 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 CRLF2Q9HC73 371 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 KRCC1Q9NPI7 259 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 ASB6Q9NWX5 421 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 VSX1Q9NZR4 365 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-204ENST00000526430 GRHPRQ9UBQ7 328 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
NEDD8-204ENST00000526430 PRSS37A4D1T9 235 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 ZAR1LA6NP61 321 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 DHHO43323 396 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 CTLA4P16410 223 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 TTKP33981 857 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 NR4A2P43354 598 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 CSNK1A1P48729 337 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
NEDD8-204ENST00000526430 STK11Q15831 433 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 CEACAM16Q2WEN9 425 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 SLC35F1Q5T1Q4 408 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 OGFRL1Q5TC84 451 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-204ENST00000526430 ALKBH2Q6NS38 261 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 RPL13AP3Q6NVV1 102 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 BHLHA15Q7RTS1 189 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-204ENST00000526430 OR6V1Q8N148 313 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 UBE2J2Q8N2K1 259 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 OR1K1Q8NGR3 316 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 NABP1Q96AH0 204 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 RADILQ96JH8 1075 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 ZNF570Q96NI8 536 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 TSSK2Q96PF2 358 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 SNX18Q96RF0 628 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 MBOAT4Q96T53 435 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 ALG12Q9BV10 488 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 ZNF747Q9BV97 191 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
NEDD8-204ENST00000526430 HCAR1Q9BXC0 346 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 GABARAPL3Q9BY60 117 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 NUAK2Q9H093 628 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 OCEL1Q9H607 264 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 DCLRE1BQ9H816 532 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 SLC25A19Q9HC21 320 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 PAPOLBQ9NRJ5 636 aaKnown RBP9.44□□□□□ -0.9
NEDD8-204ENST00000526430 POFUT2Q9Y2G5 429 aa9.44□□□□□ -0.9
NEDD8-204ENST00000526430 IGLV1-36A0A0B4J1U3 117 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 A0A1W2PR80 420 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 A6NIZ1 184 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 OR6C65A6NJZ3 312 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 AHCYL1O43865 530 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 SEC14L2O76054 403 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 IGHG1P01857 330 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 PEX2P28328 305 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 NOS3P29474 1203 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 CDAP32320 146 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 GRK5P34947 590 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 ALDH3A2P51648 485 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 RAP1BP61224 184 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 ESRRGP62508 458 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 RAP1AP62834 184 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.43□□□□□ -0.9
NEDD8-204ENST00000526430 SCGB2A2Q13296 93 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 RIPK1Q13546 671 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 AWAT1Q58HT5 328 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 THEM4Q5T1C6 240 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 SLX4IPQ5VYV7 408 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 OTPQ5XKR4 325 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 FAM205BPQ63HN1 556 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 C12orf73Q69YU5 71 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 ZBTB49Q6ZSB9 765 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 SSX8Q7RTT4 187 aa9.43□□□□□ -0.9
NEDD8-204ENST00000526430 ZBTB46Q86UZ6 589 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms