RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SIGLEC12Q96PQ1 595 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 FMO2Q99518 471 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 RBBP8Q99708 897 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 RHOXF2Q9BQY4 288 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 RAB33BQ9H082 229 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 RHOJQ9H4E5 214 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 NCOR1P1Q9H4R4 102 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 XKR8Q9H6D3 395 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TMEM165Q9HC07 324 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ASCL3Q9NQ33 180 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ZNF275Q9NSD4 429 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 CNOT2Q9NZN8 540 aaKnown RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 DPM3Q9P2X0 92 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 PISDQ9UG56 409 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 MTRF1LQ9UGC7 380 aaKnown RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 IL20RAQ9UHF4 553 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ASF1AQ9Y294 204 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 KLF2Q9Y5W3 355 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 HEBP2Q9Y5Z4 205 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 FAM186AA6NE01 2351 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 GVINP1Q7Z2Y8 2422 aa2.9□□□□□ -1.94
CD44-219ENST00000525685 PIKFYVEQ9Y2I7 2098 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 GSAPA4D1B5 854 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 OR6C74A6NCV1 312 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 TLCD2A6NGC4 264 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 C2orf74A8MZ97 194 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 H3BTX0 84 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 PDLIM1O00151 329 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 TOX3O15405 576 aaPredicted RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 PSIP1O75475 530 aaKnown RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 SPAG6O75602 509 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 SNX4O95219 450 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 TSPAN12O95859 305 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 TGFAP01135 160 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CATP04040 527 aaKnown RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 RPN2P04844 631 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ZCCHC18P0CG32 403 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 MPC1LP0DKB6 136 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 LAMP1P11279 417 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ERGP11308 486 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CCL4P13236 92 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 UGT2B7P16662 529 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 MAPK3P27361 379 aaPredicted RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 PSMB5P28074 263 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 PTPN4P29074 926 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 PHBP35232 272 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 HTR5AP47898 357 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 MTTPP55157 894 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 TAS2R39P59534 338 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ARPC4P59998 168 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 VSNL1P62760 191 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 IL18R1Q13478 541 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 NAB1Q13506 487 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ASAH1Q13510 395 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 DEFB110Q30KQ9 67 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ACSF3Q4G176 576 aaPredicted RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 SMUG1Q53HV7 270 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 FHL5Q5TD97 284 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 RSBN1Q5VWQ0 802 aaPredicted RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 DMKNQ6E0U4 476 aaPredicted RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 SPESP1Q6UW49 350 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CYHR1Q6ZMK1 362 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 MBOAT1Q6ZNC8 495 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 C3orf62Q6ZUJ4 267 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CYS1Q717R9 158 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CMC1Q7Z7K0 106 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 IFT20Q8IY31 132 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 LINC01555Q8NAE3 123 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ZNF540Q8NDQ6 660 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 OR4E2Q8NGC2 313 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 OR2L8Q8NGY9 312 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ANKRD7Q92527 254 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 RAD51AP1Q96B01 352 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 PINX1Q96BK5 328 aaKnown RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 FOPNLQ96NB1 174 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 FAM111AQ96PZ2 611 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 GPR22Q99680 433 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CTRCQ99895 268 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 MAPKAP1Q9BPZ7 522 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 UQCC2Q9BRT2 126 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 NMNAT2Q9BZQ4 307 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 C1orf21Q9H246 121 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 SRMSQ9H3Y6 488 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CAB39LQ9H9S4 337 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 POPDC3Q9HBV1 291 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 APMAPQ9HDC9 416 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 C1orf123Q9NWV4 160 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 HRASLS2Q9NWW9 162 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 TAS2R13Q9NYV9 303 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 PRELID1Q9Y255 219 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 BTRCQ9Y297 605 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 BPTFQ12830 3046 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 CACNA1GO43497 2377 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.95
CD44-219ENST00000525685 DMXL1Q9Y485 3027 aa2.9□□□□□ -1.95
CD44-219ENST00000525685 UQCRHLA0A096LP55 91 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 ARPC4-TTLL3A0A0A6YYG9 625 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 IGHV5-51A0A0C4DH38 117 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 A0A0J9YY10 115 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 A0A1W2PPV9 198 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms