RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	RGS11	O94810	467 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	GLCE	O94923	617 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	TXNDC12	O95881	172 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	IGKV1D-16	P01601	117 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	MELTF	P08582	738 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC35G6	P0C7Q6	338 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SPI1	P17947	270 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	WT1	P19544	449 aa	Predicted RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	POU3F2	P20265	443 aa	Predicted RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	S1PR1	P21453	382 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	CDK2	P24941	298 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	DCTD	P32321	178 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	CD96	P40200	585 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	PSMB10	P40306	273 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	NAA10	P41227	235 aa	Predicted RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC16A1	P53985	500 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	DLX5	P56178	289 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	RPS15	P62841	145 aa	Known RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	MC2R	Q01718	297 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	CBFB	Q13951	182 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	KIR2DS3	Q14952	304 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	HSPB2	Q16082	182 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC6A19	Q695T7	634 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC25A25	Q6KCM7	469 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	KIRREL2	Q6UWL6	708 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	STAC2	Q6ZMT1	411 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	RNF44	Q7L0R7	432 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	FCRLA	Q7L513	359 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	PLXDC1	Q8IUK5	500 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR4N5	Q8IXE1	308 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	DND1	Q8IYX4	353 aa	Known RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	CA13	Q8N1Q1	262 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ESX1	Q8N693	406 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	AVL9	Q8NBF6	648 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR6M1	Q8NGM8	313 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR4K13	Q8NH42	304 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SYNPR	Q8TBG9	265 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZCCHC10	Q8TBK6	192 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZPLD1	Q8TCW7	415 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	GRHL3	Q8TE85	626 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	FCAMR	Q8WWV6	532 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	LIPH	Q8WWY8	451 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ASB13	Q8WXK3	278 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ST8SIA4	Q92187	359 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ANKRD9	Q96BM1	317 aa	Predicted RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	AIFM2	Q9BRQ8	373 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZPBP	Q9BS86	351 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC25A18	Q9H1K4	315 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	C1orf198	Q9H425	327 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	BEX1	Q9HBH7	125 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	NOX3	Q9HBY0	568 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	GPN1	Q9HCN4	374 aa	Predicted RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	NKIRAS2	Q9NYR9	191 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	ACTR10	Q9NZ32	417 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	MRPL15	Q9P015	296 aa	Known RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	MTFP1	Q9UDX5	166 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	OPN4	Q9UHM6	478 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	GLS2	Q9UI32	602 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	GNG8	Q9UK08	70 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	PPIE	Q9UNP9	301 aa	Known RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	HIF3A	Q9Y2N7	669 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	MRPS7	Q9Y2R9	242 aa	Known RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	IER3IP1	Q9Y5U9	82 aa		7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	SPEN	Q96T58	3664 aa	Known RBP	7.05	□□□□□ -1.28
SPIDR-223	ENST00000524033	FLNC	Q14315	2725 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	IGKV1D-42	A0A075B6H8	117 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033		A0A087WUJ7	227 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	ARPC4-TTLL3	A0A0A6YYG9	625 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	URAD	A6NGE7	173 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	IDS	B3KWA1	339 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	KRBOX1	C9JBD0	128 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	IMPA2	O14732	288 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	NDUFA2	O43678	99 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNF254	O75437	659 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	KHDRBS3	O75525	346 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZFPL1	O95159	310 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	GPR75	O95800	540 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	LPL	P06858	475 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	CD37	P11049	281 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	APEH	P13798	732 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	LIF	P15018	202 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	ANXA7	P20073	488 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	TLX1	P31314	330 aa	Predicted RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	S100A11	P31949	105 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	NUP62	P37198	522 aa	Predicted RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	GPR143	P51810	404 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	SEC61A1	P61619	476 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	ID2	Q02363	134 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	SRSF4	Q08170	494 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	ALKBH1	Q13686	389 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	GK2	Q14410	553 aa	Predicted RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	EXOSC7	Q15024	291 aa	Known RBP	7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	TOMM20	Q15388	145 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	C2orf68	Q2NKX9	166 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR7E24	Q6IFN5	339 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	FIGLA	Q6QHK4	219 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	NHLRC1	Q6VVB1	395 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	TMUB2	Q71RG4	321 aa		7.04	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC16A9	Q7RTY1	509 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms