RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ARPC5O15511 151 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 CD37P11049 281 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 FSTP19883 344 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 POU3F2P20265 443 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 FBLP22087 321 aaKnown RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 HTR2CP28335 458 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ACTBP60709 375 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ACTG1P63261 375 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 HSD11B2P80365 405 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 C14orf28Q4W4Y0 310 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 DCAF12L2Q5VW00 463 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 OGFOD3Q6PK18 319 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 GRINAQ7Z429 371 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 GABRG1Q8N1C3 465 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF441Q8N8Z8 693 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 TSTD1Q8NFU3 115 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 OR52N5Q8NH56 324 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 STK35Q8TDR2 534 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 RELTQ969Z4 430 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 SEH1LQ96EE3 360 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 EXO5Q9H790 373 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF304Q9HCX3 659 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 COA3Q9Y2R0 106 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 UNC13CQ8NB66 2214 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 LOC105371267A0A1B0GV96 52 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 hCG_1807616A0A1W2PRN6 198 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SULT1C2O00338 296 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF217O75362 1048 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SRSF10O75494 262 aaKnown RBP9.94□□□□□ -0.82
HDAC9-228ENST00000524023 MPZL1O95297 269 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 AHSA1O95433 338 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 ITGB2P05107 769 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 MELTFP08582 738 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 ACSM4P0C7M7 580 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 HLA-DOBP13765 273 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 CRABP1P29762 137 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 ARL4DP49703 201 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 OR1D5P58170 312 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SLC26A5P58743 744 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 GLO1Q04760 184 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 MPPED2Q15777 294 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 WDR45BQ5MNZ6 344 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 GLYATL3Q5SZD4 288 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 GPAT4Q86UL3 456 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 DUSP19Q8WTR2 217 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 TNFAIP8L1Q8WVP5 186 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SLC25A44Q96H78 314 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SLC41A2Q96JW4 573 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 ALX4Q9H161 411 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-228ENST00000524023 TMEM138Q9NPI0 162 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 CGGBP1Q9UFW8 167 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SPEF1Q9Y4P9 236 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 MRPS18BQ9Y676 258 aaKnown RBP9.94□□□□□ -0.82
HDAC9-228ENST00000524023 FXYD6-FXYD2A0A087WZ82 144 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 FTCDNL1E5RQL4 147 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 OR2T1O43869 369 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 SDC3O75056 442 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 RP2O75695 350 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 B3GALNT1O75752 331 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 LPLP06858 475 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 TAS2R19P59542 299 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 C4orf46Q504U0 113 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 B3GNTL1Q67FW5 361 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-228ENST00000524023 TSSK4Q6SA08 328 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF627Q7L945 461 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 GLRX5Q86SX6 157 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 KDM8Q8N371 416 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 TMEM229BQ8NBD8 167 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 OR6M1Q8NGM8 313 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 VN1R1Q9GZP7 353 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 FXYD6Q9H0Q3 95 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 C1orf198Q9H425 327 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 EMC9Q9Y3B6 208 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 R4GMQ9 66 aa9.94□□□□□ -0.82
HDAC9-228ENST00000524023 DCDC2BA2VCK2 349 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 OR6C76A6NM76 312 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 SOX1O00570 391 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-228ENST00000524023 ADAM10O14672 748 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 GABRA1P14867 456 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 PPP3CBP16298 524 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 IL11P20809 199 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 HNRNPKP61978 463 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC9-228ENST00000524023 CFHR1Q03591 330 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 C1orf189Q5VU69 101 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 RGS7BPQ6MZT1 257 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-228ENST00000524023 TMEM205Q6UW68 189 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 OR51A2Q8NGJ7 313 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 GAL3ST1Q99999 423 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 POTEKPQ9BYX7 375 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 ARL6Q9H0F7 186 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 POFUT1Q9H488 388 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 SCPEP1Q9HB40 452 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 G6PC2Q9NQR9 355 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 MED9Q9NWA0 146 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 UPB1Q9UBR1 384 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 MKL2Q9ULH7 1088 aa9.93□□□□□ -0.82
HDAC9-228ENST00000524023 HHLA2Q9UM44 414 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms