RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 PGBD2Q6P3X8 592 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 UGT2A3Q6UWM9 527 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 BCAS4Q8TDM0 211 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 FOXN4Q96NZ1 517 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 EMC7Q9NPA0 242 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 REV1Q9UBZ9 1251 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 DUSP13Q9UII6 198 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 TIMM10BQ9Y5J6 103 aa16.42■□□□□ 0.22
FBXO28-205ENST00000523990 IGLV3-9A0A075B6K5 115 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 C5orf49A4QMS7 147 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 LCKP06239 509 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 DAOP14920 347 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 CCNOP22674 350 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 SLC6A6P31641 620 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 WNT5AP41221 380 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 CDKN2AP42771 156 aaKnown RBP16.41■□□□□ 0.22
FBXO28-205ENST00000523990 NR4A2P43354 598 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 HMGA2P52926 109 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 PPP2R2BQ00005 443 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 TSPAN31Q12999 210 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 CARTPTQ16568 116 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 ZNF620Q6ZNG0 422 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 TRPM8Q7Z2W7 1104 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 ZNF101Q8IZC7 436 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 CCDC124Q96CT7 223 aaKnown RBP16.41■□□□□ 0.22
FBXO28-205ENST00000523990 ASB9Q96DX5 294 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 CLPTM1LQ96KA5 538 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 BTBD10Q9BSF8 475 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 WACQ9BTA9 647 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 MS4A5Q9H3V2 200 aa16.41■□□□□ 0.22
FBXO28-205ENST00000523990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.224e-12■■■■■ 45.5
FBXO28-205ENST00000523990 MALRD1Q5VYJ5 2156 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 A0A1W2PPW3 197 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 C12orf71A8MTZ7 269 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 SLC16A7O60669 478 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 ICMTO60725 284 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 CLPTM1O96005 669 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-205ENST00000523990 GDI2P50395 445 aaKnown RBP16.4■□□□□ 0.22
FBXO28-205ENST00000523990 KLF3P57682 345 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-205ENST00000523990 ZNF774Q6NX45 483 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 ALDH16A1Q8IZ83 802 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 OR9Q2Q8NGE9 314 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 OR4C15Q8NGM1 316 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 OR1J1Q8NGS3 322 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 SYNPRQ8TBG9 265 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 ERMAPQ96PL5 475 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-205ENST00000523990 TRIM15Q9C019 465 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 BPESC1Q9GZL8 116 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 NUAK2Q9H093 628 aa16.4■□□□□ 0.22
FBXO28-205ENST00000523990 COA3Q9Y2R0 106 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-205ENST00000523990 TNFRSF11BO00300 401 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 ARPC3O15145 178 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 TLX2O43763 284 aaPredicted RBP16.39■□□□□ 0.21
FBXO28-205ENST00000523990 KHDRBS3O75525 346 aaKnown RBP16.39■□□□□ 0.21
FBXO28-205ENST00000523990 STAMBPO95630 424 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 GLB1L2Q8IW92 636 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 ICA1LQ8NDH6 482 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 GNPDA2Q8TDQ7 276 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 C11orf40Q8WZ69 217 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 SAMD8Q96LT4 415 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 RERGLQ9H628 205 aa16.39■□□□□ 0.21
FBXO28-205ENST00000523990 DCTN6O00399 190 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 UBOX5O94941 541 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 NAT2P11245 290 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 GIFP27352 417 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 SCRN3Q0VDG4 424 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 AQP6Q13520 282 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 GGTLC2Q14390 218 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 NKPD1Q17RQ9 610 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 ALKBH6Q3KRA9 238 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 C6orf52Q5T4I8 152 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 OTPQ5XKR4 325 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 ZNF770Q6IQ21 691 aaPredicted RBP16.38■□□□□ 0.21
FBXO28-205ENST00000523990 RFPL4BQ6ZWI9 263 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 ZNF786Q8N393 782 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 LINC00471Q8N535 108 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 UBASH3BQ8TF42 649 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 TSSK2Q96PF2 358 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 SNX18Q96RF0 628 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 THTPAQ9BU02 230 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 IFT27Q9BW83 186 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 VNN3Q9NY84 501 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 TAAR3PQ9P1P4 343 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 JMJD1CQ15652 2540 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 TANC2Q9HCD6 1990 aa16.38■□□□□ 0.21
FBXO28-205ENST00000523990 IGHV4-61A0A0C4DH41 118 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 ACOT8O14734 319 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 DOK2O60496 412 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 NCR1O76036 304 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 MPZL1O95297 269 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 GAAP10253 952 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 COX5BP10606 129 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 HIST1H1CP16403 213 aaKnown RBP16.37■□□□□ 0.21
FBXO28-205ENST00000523990 SELENOVP59797 346 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 LSM6P62312 80 aaKnown RBP16.37■□□□□ 0.21
FBXO28-205ENST00000523990 PPP1R8Q12972 351 aaKnown RBP16.37■□□□□ 0.21
FBXO28-205ENST00000523990 FAM98BQ52LJ0 330 aaKnown RBP16.37■□□□□ 0.21
FBXO28-205ENST00000523990 ELFN2Q5R3F8 820 aa16.37■□□□□ 0.21
FBXO28-205ENST00000523990 LEG1Q6P5S2 330 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms