RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PPA1Q15181 289 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 EXOSC6Q5RKV6 272 aaKnown RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 Q6ZTK2 550 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ANGPTL5Q86XS5 388 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 KCNG3Q8TAE7 436 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 STK35Q8TDR2 534 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 VSTM2LQ96N03 204 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 KCNN3Q9UGI6 736 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 STEAP1Q9UHE8 339 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ANKUB1A6NFN9 424 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 FOXS1O43638 330 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 GUSBP08236 651 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 LCN10Q6JVE6 187 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC16A12Q6ZSM3 486 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 CARFQ8N187 725 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF321PQ8N8H1 164 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR6F1Q8NGZ6 308 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 DVL3Q92997 716 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ACKR4Q9NPB9 350 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 MYOTQ9UBF9 498 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR14J1Q9UGF5 321 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 KLF13Q9Y2Y9 288 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 A0A0A6YYH2 397 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 FITM1A5D6W6 292 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 A6NJ64 397 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 LAP3P28838 519 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 CLDN15P56746 228 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 CD226Q15762 336 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 NOXA1Q86UR1 476 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 DEDD2Q8WXF8 326 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 OXGR1Q96P68 337 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 DUSP15Q9H1R2 295 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 PRDM6Q9NQX0 595 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 PLA2G3Q9NZ20 509 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF223Q9UK11 482 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 B4DXG7 233 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 HSPB6O14558 160 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ALDOBP05062 364 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 HOXB9P17482 250 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 HTR2AP28223 471 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 HTR2BP41595 481 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 EFNA3P52797 238 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 MEX3BQ6ZN04 569 aaKnown RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 SGPP2Q8IWX5 399 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ROBO4Q8WZ75 1007 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 IP6K3Q96PC2 410 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 TMEM43Q9BTV4 400 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 SLCO1C1Q9NYB5 712 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 SPEF1Q9Y4P9 236 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 F5H5P2 479 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 M0R296 226 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 TNFSF11O14788 317 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 SPNP16150 400 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ACHEP22303 614 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 PRKACBP22694 351 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 CCR6P51684 374 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 GRB2P62993 217 aaKnown RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 SLC10A1Q14973 349 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 DMRTC1Q5HYR2 192 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 BATF2Q8N1L9 274 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 D2HGDHQ8N465 521 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 DTWD2Q8NBA8 298 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 GIMAP1Q8WWP7 306 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 LIPHQ8WWY8 451 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 C10orf90Q96M02 699 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 NECAB3Q96P71 396 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 CBR3O75828 277 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 WNT1P04628 370 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF806P0C7X5 589 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ERGP11308 486 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 AGTR1P30556 359 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 MYBPHQ13203 477 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 THEM4Q5T1C6 240 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF585AQ6P3V2 769 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 GLIPR1L1Q6UWM5 242 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 IDO2Q6ZQW0 420 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZADH2Q8N4Q0 377 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR56B4Q8NH76 319 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 MICU1Q9BPX6 476 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 C1QTNF6Q9BXI9 259 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 BANF2Q9H503 90 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 ISYNA1Q9NPH2 558 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 COQ3Q9NZJ6 369 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 CES1P1Q9UKY3 287 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 CACNA1HO95180 2353 aa11.83□□□□□ -0.52
PCDHGB1-201ENST00000523390 PPIAP62937 165 aaKnown RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 WIPI1Q5MNZ9 446 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 KIF18BQ86Y91 864 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 C12orf45Q8N5I9 185 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms