RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SNX13Q9Y5W8 968 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 CENPBD1B2RD01 187 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 VIMP08670 466 aaKnown RBP13.04□□□□□ -0.32
MRPS28-209ENST00000522987 TSPAN19P0C672 248 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 ARFIP2P53365 341 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 AWAT1Q58HT5 328 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 MBNL2Q5VZF2 373 aaKnown RBP13.04□□□□□ -0.32
MRPS28-209ENST00000522987 C1orf94Q6P1W5 598 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 NRMQ8IXM6 262 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 ALDH16A1Q8IZ83 802 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 SIGLECL1Q8N7X8 197 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 TSPEARQ8WU66 669 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 SLC7A6Q92536 515 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 TAF15Q92804 592 aaKnown RBP eCLIP13.04□□□□□ -0.32
MRPS28-209ENST00000522987 C4orf45Q96LM5 186 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 ZNF583Q96ND8 569 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 JMJD8Q96S16 334 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 SMURF2Q9HAU4 748 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 STX18Q9P2W9 335 aaKnown RBP13.04□□□□□ -0.32
MRPS28-209ENST00000522987 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 A4GNTQ9UNA3 340 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 HIF3AQ9Y2N7 669 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 PCDHGB1Q9Y5G3 927 aa13.04□□□□□ -0.32
MRPS28-209ENST00000522987 IGHV3OR16-10A0A075B7F0 116 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 LOC100653049A0A140TA62 436 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 J3QLI3 93 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 KRT34O76011 436 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 ABHD16AO95870 558 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 CST2P09228 141 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 GPR4P46093 362 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 COMPP49747 757 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-209ENST00000522987 ERFP50548 548 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
MRPS28-209ENST00000522987 PSG7Q13046 419 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 KLF10Q13118 480 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 USP43Q70EL4 1123 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 VTCN1Q7Z7D3 282 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 BCL6BQ8N143 479 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-209ENST00000522987 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 LRRC75AQ8NAA5 344 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 OR2Z1Q8NG97 314 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 ALG12Q9BV10 488 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 RERGLQ9H628 205 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 ADAM18Q9Y3Q7 739 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 TIMM10BQ9Y5J6 103 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 NPTNQ9Y639 398 aa13.03□□□□□ -0.32
MRPS28-209ENST00000522987 IGHV3-64DA0A0J9YX35 117 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF205O95201 554 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 MSR1P21757 451 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 KDELR2P33947 212 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 GUCA1AP43080 201 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-209ENST00000522987 HTR5AP47898 357 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ARHGDIAP52565 204 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ST3GAL3Q11203 375 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ARMCX4Q5H9R4 360 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 MTX3Q5HYI7 312 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 TBPL2Q6SJ96 375 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 Q6ZR03 302 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 JAZF1Q86VZ6 243 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 OR5AS1Q8N127 324 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 OR8J3Q8NGG0 315 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ITLN1Q8WWA0 313 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 LIPHQ8WWY8 451 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 STON2Q8WXE9 905 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 PRRC1Q96M27 445 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 SH3GL1Q99961 368 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ELOVL3Q9HB03 270 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 POLE4Q9NR33 117 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 DDX28Q9NUL7 540 aaKnown RBP13.02□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF69Q9UC07 566 aa13.02□□□□□ -0.33
MRPS28-209ENST00000522987 SOX21Q9Y651 276 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-209ENST00000522987 NPIPB13A6NJU9 1138 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 EFCAB9A8MZ26 197 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 FAM220BPB1ANY3 271 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 HMGB1P1B2RPK0 211 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 NPIPB4C9JG80 1138 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 IMPA2O14732 288 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 KCNAB3O43448 404 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 DOK2O60496 412 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 FSHBP01225 129 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 IFNA14P01570 189 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 IGHV2-70P01814 119 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 IGHMP01871 453 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 NR2C1P13056 603 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 FPR2P25090 351 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 RPL4P36578 427 aaKnown RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 LIMS1P48059 325 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 SLC9A3P48764 834 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 SLC3A1Q07837 685 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 ERICH5Q6P6B1 374 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 UNQ6126/PRO20091Q6UXV3 157 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 OAFQ86UD1 273 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 TREML1Q86YW5 311 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 POU5F2Q8N7G0 328 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 OR2T12Q8NG77 320 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 DVL3Q92997 716 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 CMBLQ96DG6 245 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms