RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MVKQ03426 396 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 PCGF3Q3KNV8 242 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 MESTQ5EB52 335 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 FGD3Q5JSP0 725 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 OTPQ5XKR4 325 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 RINLQ6ZS11 566 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 RFPL4BQ6ZWI9 263 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 ALDH16A1Q8IZ83 802 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 ABHD4Q8TB40 342 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 SLC7A13Q8TCU3 470 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 IPCEF1Q8WWN9 437 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-209ENST00000522243 CMTM5Q96DZ9 223 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 MARS2Q96GW9 593 aaKnown RBP17.65■□□□□ 0.42
SDCBP-209ENST00000522243 OR2J1Q9GZK6 312 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 POLE4Q9NR33 117 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 ADA2Q9NZK5 511 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 FAM32AQ9Y421 112 aaKnown RBP17.65■□□□□ 0.42
SDCBP-209ENST00000522243 B4DSR2 109 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 SPRY3O43610 288 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 DIRAS1O95057 198 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 NGFP01138 241 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 SRP14P37108 136 aaKnown RBP17.64■□□□□ 0.41
SDCBP-209ENST00000522243 PCBD1P61457 104 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 MOGQ16653 247 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 USP51Q70EK9 711 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 FAM86B1Q8N7N1 296 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 RASD2Q96D21 266 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 ZNF570Q96NI8 536 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 ANKRD19PQ9H560 264 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 DECR2Q9NUI1 292 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 NKIRAS2Q9NYR9 191 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 NDUFAF4Q9P032 175 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 CACNG2Q9Y698 323 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 V9GYQ6 96 aa17.64■□□□□ 0.41
SDCBP-209ENST00000522243 IGHV1-69-2A0A0G2JMI3 117 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 XKRYO14609 159 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 MT-ND5P03915 603 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 THBS2P35442 1172 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 ZNF81P51508 661 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 PPP1CBP62140 327 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 FAM122BQ7Z309 247 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 GLCCI1Q86VQ1 547 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 FAM156AQ8NDB6 213 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 KLF14Q8TD94 323 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-209ENST00000522243 RERGLQ9H628 205 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 IL20RAQ9UHF4 553 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 TMEM5Q9Y2B1 443 aa17.63■□□□□ 0.41
SDCBP-209ENST00000522243 TEX13CA0A0J9YWL9 993 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 TRBV4-1A0A0J9YWV2 114 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 C12orf71A8MTZ7 269 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 IMPA2O14732 288 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 PTP4A3O75365 173 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 IGHV1-46P01743 117 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 TFP02787 698 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 GAAP10253 952 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 CTLA4P16410 223 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 PRDX6P30041 224 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 CRYBB2P43320 205 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 LMO4P61968 165 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 UNQ6126/PRO20091Q6UXV3 157 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 OR52J3Q8NH60 311 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 C4orf45Q96LM5 186 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 SAP30LQ9HAJ7 183 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 SPAG4Q9NPE6 437 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 DCAF13Q9NV06 445 aaKnown RBP17.62■□□□□ 0.41
SDCBP-209ENST00000522243 SIGLEC7Q9Y286 467 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 ATRQ13535 2644 aa17.62■□□□□ 0.41
SDCBP-209ENST00000522243 A0A1W2PRQ8 180 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 PRSS37A4D1T9 235 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 ZSCAN5BA6NJL1 495 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 GMNNO75496 209 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 NDUFB2O95178 105 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 RHCEP18577 417 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 OMPP47874 163 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 LIMS1P48059 325 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 MMP15P51511 669 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 TEKQ02763 1124 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 KRR1Q13601 381 aaKnown RBP17.61■□□□□ 0.41
SDCBP-209ENST00000522243 DGCR6Q14129 220 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 SEC23BQ15437 767 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 MBNL2Q5VZF2 373 aaKnown RBP17.61■□□□□ 0.41
SDCBP-209ENST00000522243 THSD4Q6ZMP0 1018 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 TMEM186Q96B77 213 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 RSRC1Q96IZ7 334 aaKnown RBP17.61■□□□□ 0.41
SDCBP-209ENST00000522243 C7orf34Q96L11 122 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 NDEL1Q9GZM8 345 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 ELOVL3Q9HB03 270 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 HIF1ANQ9NWT6 349 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 SAMD4AQ9UPU9 718 aaKnown RBP17.61■□□□□ 0.41
SDCBP-209ENST00000522243 AURKCQ9UQB9 309 aa17.61■□□□□ 0.41
SDCBP-209ENST00000522243 COL6A5A8TX70 2615 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 PLSCR5A0PG75 271 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 SOCS2O14508 198 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 SNX3O60493 162 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 DOK2O60496 412 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 MPZL1O95297 269 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 MSMBP08118 114 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 ARHGDIAP52565 204 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 SYT9Q86SS6 491 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 LRRC37BQ96QE4 947 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms