RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SDK2Q58EX2 2172 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 IGLV3-32A0A0A0MS00 114 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 NPIPA5A0A0B4J1W7 369 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 A0A0G2JMM0 328 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1W2PPB8 328 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1W2PQD3 144 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1W2PRQ8 180 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1W2PRS3 328 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PINLYPA6NC86 204 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SERINC4A6NH21 518 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 KIR3DP1A8MWS1 328 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 FAM220BPB1ANY3 271 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 C5orf58C9J3I9 102 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 NPIPA7E9PJI5 369 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 G3V3Y1 287 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 H3BNH8 94 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 H7C423 109 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 M0QX08 132 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 KIAA0513O60268 411 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ICOSLGO75144 302 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 TRIM3O75382 744 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 UGT2B17O75795 530 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ATP5HO75947 161 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 GLSO94925 669 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 H6PDO95479 791 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 OXSR1O95747 527 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 BCHEP06276 602 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 DBIP07108 87 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 QDPRP09417 244 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 NPIPA8P0DM63 369 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CCL3P10147 92 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ETS2P15036 469 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 HPGDP15428 266 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ELAVL4P26378 380 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 MC5RP33032 325 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 EVI2BP34910 448 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PCGF2P35227 344 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 WNT5AP41221 380 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PTGDSP41222 190 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 RFX3P48380 749 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 DNASE1L1P49184 302 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 NUDT2P50583 147 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF41P51814 821 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SLC7A2P52569 658 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CRISP3P54108 245 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CDH11P55287 796 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PPIAP62937 165 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 KCNJ2P63252 427 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 HPCAP84074 193 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CDK6Q00534 326 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PLGLB1Q02325 96 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 LIPEQ05469 1076 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 C17orf67Q0P5P2 114 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SCARB2Q14108 478 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 VEZF1Q14119 521 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SELPLGQ14242 412 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 INAQ16352 499 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 MAPK14Q16539 360 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SYPL1Q16563 259 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CYP51A1Q16850 503 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ZSWIM7Q19AV6 140 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 HYAL4Q2M3T9 481 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 GPAT3Q53EU6 434 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SAMD4BQ5PRF9 694 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ARMC4Q5T2S8 1044 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PRAMEF20Q5VT98 475 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CST9LP1Q5W188 147 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 TIGD3Q6B0B8 471 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 REEP3Q6NUK4 255 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ERICH5Q6P6B1 374 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 APOOLQ6UXV4 268 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 FRRS1Q6ZNA5 592 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CCDC80Q76M96 950 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 OLIG3Q7RTU3 272 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 GALNTL5Q7Z4T8 443 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 MARCH3Q86UD3 253 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SLC22A16Q86VW1 577 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 COMMD2Q86X83 199 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 MISPQ8IVT2 679 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SLC30A8Q8IWU4 369 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PEX5LQ8IYB4 626 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF440Q8IYI8 595 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 DEFB107AQ8IZN7 70 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ARHGAP24Q8N264 748 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 C10orf111Q8N326 155 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 FADS6Q8N9I5 356 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ZFP62Q8NB50 900 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 OR2M7Q8NG81 312 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 OR2M3Q8NG83 312 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 OR10A6Q8NH74 314 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 MAL2Q969L2 176 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 EFHD2Q96C19 240 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 DTNBP1Q96EV8 351 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SGK494Q96LW2 274 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SFXN2Q96NB2 322 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 DOHHQ9BU89 302 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 TRAF4Q9BUZ4 470 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 OSBPL11Q9BXB4 747 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 HES7Q9BYE0 225 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 TBL1XR1Q9BZK7 514 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms