RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ASF1AQ9Y294 204 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC17A4Q9Y2C5 497 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 CHTOPQ9Y3Y2 248 aaKnown RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 N6AMT1Q9Y5N5 214 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 CDH10Q9Y6N8 788 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 PXDNQ92626 1479 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ROBO1Q9Y6N7 1651 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 TIAM2Q8IVF5 1701 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 MAST2Q6P0Q8 1798 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 FLT4P35916 1363 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 CEMIPQ8WUJ3 1361 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM2Q9UHN6 1383 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 CROCCQ5TZA2 2017 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 KIF13BQ9NQT8 1826 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 ADGRL3Q9HAR2 1447 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 SCN7AQ01118 1682 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 RREB1Q92766 1687 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 A8MUA0 341 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF99A8MXY4 864 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 NDUFAB1O14561 156 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TNFSF11O14788 317 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZBTB5O15062 677 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 C6orf47O95873 294 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CD160O95971 181 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 SERPINE2P07093 398 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 IGHV3-43DP0DP04 118 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CTRB1P17538 263 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TCN1P20061 433 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CMA1P23946 247 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 DCKP27707 260 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CD1BP29016 333 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CRISP3P54108 245 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 NUP107P57740 925 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 RGS8P57771 180 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TAS2R19P59542 299 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC25A11Q02978 314 aaKnown RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF92Q03936 586 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 NRF1Q16656 503 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 KLHL40Q2TBA0 621 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 Q6ZN92 141 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 COX15Q7KZN9 410 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMCO2Q7Z6W1 182 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM179BQ7Z7N9 219 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM135Q86UB9 458 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM61Q8N0U2 210 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 GABRG1Q8N1C3 465 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 COMMD1Q8N668 190 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 PRELID2Q8N945 189 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR52E5Q8NH55 327 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 DTX3LQ8TDB6 740 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 MYDGFQ969H8 173 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TOP1MTQ969P6 601 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM101Q96IK0 257 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC35E1Q96K37 410 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 HSFY1Q96LI6 401 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 NAT9Q9BTE0 207 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TEKT3Q9BXF9 490 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 YTHDF1Q9BYJ9 559 aaKnown RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 API5Q9BZZ5 524 aaKnown RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 DNTTIP1Q9H147 329 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CHMP4BQ9H444 224 aaKnown RBP2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 EXD2Q9NVH0 621 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 KCNIP1Q9NZI2 227 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 MTCH1Q9NZJ7 389 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 TRAF3IP3Q9Y228 551 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 SBF2Q86WG5 1849 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 SBNO1A3KN83 1393 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 GTF3C1Q12789 2109 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 CCDC88AQ3V6T2 1871 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 JCADQ9P266 1359 aa2.35□□□□□ -2.03
HMGN1P28-201ENST00000521340 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 C12orf71A8MTZ7 269 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 SIRPB1O00241 398 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC31A2O15432 143 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 MGRN1O60291 552 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 MMP23AO75900 390 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 UTS2O95399 124 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 ICAM2P13598 275 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF19P17023 458 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF24P17028 368 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 FUT3P21217 361 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 GPX4P36969 197 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 NBL1P41271 181 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 TAF6P49848 677 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 CRISP1P54107 249 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 STX17P56962 302 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 LYZP61626 148 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 RSPO1Q2MKA7 263 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 CAVIN4Q5BKX8 364 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 PIP5KL1Q5T9C9 394 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 C9orf135Q5VTT2 229 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 MBOAT1Q6ZNC8 495 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 LINC00173Q6ZV60 143 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC16A14Q7RTX9 510 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 CMTM1Q8IZ96 169 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 C8orf31Q8N9H6 132 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 SUMF2Q8NBJ7 301 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR56A4Q8NGH8 313 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR2G2Q8NGZ5 317 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms