RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 OR10R2Q8NGX6 335 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 NUBPLQ8TB37 319 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TCP10LQ8TDR4 215 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 APH1AQ96BI3 265 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 B3GALT6Q96L58 329 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 GLT1D1Q96MS3 346 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TSSK3Q96PN8 268 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ARHGDIGQ99819 225 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 EBF4Q9BQW3 602 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 CNPY3Q9BT09 278 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 NAT9Q9BTE0 207 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 SPACA1Q9HBV2 294 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TMEM9Q9P0T7 183 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 CTSFQ9UBX1 484 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 MOKQ9UQ07 419 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TNRQ92752 1358 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 CENPJQ9HC77 1338 aaPredicted RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 MAPK8IP3Q9UPT6 1336 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 ZNF816-ZNF321PA0A0X1KG74 233 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 A6NDN8 102 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 IQCF5A8MTL0 148 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 SMKR1H3BMG3 65 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 SLC19A2O60779 497 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 FKBP6O75344 327 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 LCA5LO95447 670 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L4P0CJ87 422 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CCDC166P0CW27 439 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 IVDP26440 423 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 LCN1P31025 176 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 SERPINB5P36952 375 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 GPX4P36969 197 aaPredicted RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 RFC3P40938 356 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 VDAC2P45880 294 aaPredicted RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 RORCP51449 518 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CLDN6P56747 220 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 TNNC1P63316 161 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CSNK1G2P78368 415 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 SLC25A11Q02978 314 aaKnown RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 TGFBR3Q03167 851 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 TWF1Q12792 350 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 GPR176Q14439 515 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CLINT1Q14677 625 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 PSG3Q16557 428 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CASC10Q5T4H9 136 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 C6orf183Q5T699 404 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 ADNP2Q6IQ32 1131 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CNIH2Q6PI25 160 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 TMPRSS11AQ6ZMR5 421 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 ZNF620Q6ZNG0 422 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 HSD17B13Q7Z5P4 300 aaPredicted RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 ZNF677Q86XU0 584 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 ZADH2Q8N4Q0 377 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 MED8Q96G25 268 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 ACBD6Q9BR61 282 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 NICN1Q9BSH3 213 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 HES7Q9BYE0 225 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 NXF3Q9H4D5 531 aaKnown RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 TMEM38AQ9H6F2 299 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 PLGRKTQ9HBL7 147 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 ACP6Q9NPH0 428 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CTPS2Q9NRF8 586 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 AGPAT4Q9NRZ5 378 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 MARCH5Q9NX47 278 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 CD300AQ9UGN4 299 aa2.93□□□□□ -1.94
SQLE-204ENST00000520493 RBMX2Q9Y388 322 aaKnown RBP2.93□□□□□ -1.94
SQLE-204ENST00000520493 RAB19A4D1S5 217 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 EPOPA6NHQ4 379 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 SLC9A3R1O14745 358 aaPredicted RBP2.92□□□□□ -1.94
SQLE-204ENST00000520493 ICOSLGO75144 302 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 HSPB1P04792 205 aaKnown RBP2.92□□□□□ -1.94
SQLE-204ENST00000520493 GFAPP14136 432 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 FOLR1P15328 257 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 BGNP21810 368 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 SLC26A3P40879 764 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 DIO3P55073 304 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 UCNP55089 124 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 TAS2R19P59542 299 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 GGTLC2Q14390 218 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 GPNMBQ14956 572 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 OR7A5Q15622 319 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 TSC22D1Q15714 1073 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 C5orf64Q2M2E5 130 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 RNF212Q495C1 297 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 UBE2UQ5VVX9 321 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 C14orf178Q8N769 122 aaPredicted RBP2.92□□□□□ -1.94
SQLE-204ENST00000520493 OR1N2Q8NGR9 330 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 OR9G1Q8NH87 305 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 CACNG8Q8WXS5 425 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 FCRL1Q96LA6 429 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 SERPINB12Q96P63 405 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 OR5B12Q96R08 314 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 TSG101Q99816 390 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 LZTS2Q9BRK4 669 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 CALN1Q9BXU9 219 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 MAP1LC3CQ9BXW4 147 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 DEFB127Q9H1M4 99 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 SRMSQ9H3Y6 488 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 CHMP4BQ9H444 224 aaKnown RBP2.92□□□□□ -1.94
SQLE-204ENST00000520493 PTGES2Q9H7Z7 377 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 SLC25A22Q9H936 323 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms