RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 AKR7LQ8NHP1 331 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FNDC8Q8TC99 324 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 MAIP1Q8WWC4 291 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PSMF1Q92530 271 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PIGCQ92535 297 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 AMDHD1Q96NU7 426 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PARD6BQ9BYG5 372 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FGFBP2Q9BYJ0 223 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 METTL17Q9H7H0 456 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 EXOSC3Q9NQT5 275 aaKnown RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 NUDT15Q9NV35 164 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 SMOXQ9NWM0 555 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAB20Q9NX57 234 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 EHFQ9NZC4 300 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PTBP2Q9UKA9 531 aaKnown RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 GAB2Q9UQC2 676 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMED5Q9Y3A6 229 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAM215AQ9Y5M1 114 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 ABCA13Q86UQ4 5058 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR52A4PA6NMU1 304 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CDC7O00311 574 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NR5A2O00482 541 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR2B3O76000 313 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 TROVE2P10155 538 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 POU2F1P14859 743 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ACADSP16219 412 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 IMPDH1P20839 514 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CXCR2P25025 360 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 LAP3P28838 519 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR1E1P30953 314 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 GPR1P46091 355 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 RND3P61587 244 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 PLOD1Q02809 727 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 COX10Q12887 443 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CYP51A1Q16850 503 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ACER2Q5QJU3 275 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CLEC2AQ6UVW9 174 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NDUFAF7Q7L592 441 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 TAC4Q86UU9 113 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC22A9Q8IVM8 553 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 BPIFB2Q8N4F0 458 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 MDS2Q8NDY4 140 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 FAM83FQ8NEG4 500 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR9K2Q8NGE7 335 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR5D13Q8NGL4 314 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 TFB1MQ8WVM0 346 aaKnown RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 DNAJA3Q96EY1 480 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 C11orf24Q96F05 449 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ART5Q96L15 291 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NPY6RQ99463 290 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC6A7Q99884 636 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 DEFB127Q9H1M4 99 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF226Q9NYT6 803 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 SPATA7Q9P0W8 599 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 RASD1Q9Y272 281 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OARD1Q9Y530 152 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NPTNQ9Y639 398 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 KIAA1549Q9HCM3 1950 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 MUC4Q99102 2169 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 IGHV3OR16-12A0A075B7B8 117 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 GOLGA8OA6NCC3 632 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CCDC182A6NF36 153 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF716A6NP11 495 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 FOXI3A8MTJ6 420 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 GOLGA8NF8WBI6 632 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 K7EQG2 157 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 BCKDKO14874 412 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 POLR2DO15514 142 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZFAND5O76080 213 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CLDN9O95484 217 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SERPINA3P01011 423 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF735P0CB33 412 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 XRCC1P18887 633 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RPL13AP40429 203 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RPL34P49207 117 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ARHGDIAP52565 204 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 DAOAP59103 153 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RHOAP61586 193 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 EWSR1Q01844 656 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 LOXL1Q08397 574 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CALCOCO2Q13137 446 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RCN1Q15293 331 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CHI3L2Q15782 390 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 FBXL19-AS1Q494R0 122 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CTSL3PQ5NE16 218 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 PRAMEF5Q5TYX0 476 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 METTL11BQ5VVY1 283 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 PRAMEF6Q5VXH4 476 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC25A25Q6KCM7 469 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ACSM5Q6NUN0 579 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 STAC2Q6ZMT1 411 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 USP43Q70EL4 1123 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ABHD13Q7L211 337 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SETD3Q86TU7 594 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 OOSP2Q86WS3 158 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SNX31Q8N9S9 440 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 GTF3AQ92664 365 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ISG20Q96AZ6 181 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms