RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 PATL1Q86TB9 770 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 OR2Z1Q8NG97 314 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 PRSS27Q9BQR3 290 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 CCDC28BQ9BUN5 200 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 ZNF426Q9BUY5 554 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 WNT5BQ9H1J7 359 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 PATZ1Q9HBE1 687 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 C20orf141Q9NUB4 165 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
CSGALNACT1-204ENST00000517494 ANGPT2O15123 496 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TGDSO95455 350 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ABHD16AO95870 558 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CD55P08174 381 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ADH4P08319 380 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NR2C1P13056 603 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TNFRSF1BP20333 461 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OMGP23515 440 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ZMYND11Q15326 602 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SLC9A3R2Q15599 337 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ARMC4Q5T2S8 1044 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SPATC1Q76KD6 591 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NKAIN4Q8IVV8 208 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CLDN22Q8N7P3 220 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR52E2Q8NGJ4 325 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 C4orf45Q96LM5 186 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CGREF1Q99674 301 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SMURF2Q9HAU4 748 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ELOVL3Q9HB03 270 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SH3GLB1Q9Y371 365 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NDUFAF1Q9Y375 327 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TIMM10BQ9Y5J6 103 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SOX21Q9Y651 276 aaPredicted RBP12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TRRAPQ9Y4A5 3859 aa12.83□□□□□ -0.36
CSGALNACT1-204ENST00000517494 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 H3BSA7 217 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TNFRSF1AP19438 455 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 GSTM3P21266 225 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MDKP21741 143 aaPredicted RBP12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MTNR1AP48039 350 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SLC6A9P48067 706 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PCBD1P61457 104 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PSG7Q13046 419 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NFYCQ13952 458 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 LAPTM4AQ15012 233 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TMEM155Q4W5P6 130 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ALG10Q5BKT4 473 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 INTS11Q5TA45 600 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 FAM27BQ5VT28 67 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ARL9Q6T311 187 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ZER1Q7Z7L7 766 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SLC30A8Q8IWU4 369 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 C1orf174Q8IYL3 243 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PARP8Q8N3A8 854 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR10A6Q8NH74 314 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TMEM239Q8WW34 195 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ITLN1Q8WWA0 313 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RBP7Q96R05 134 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PCDHAC1Q9H158 963 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TNFRSF19Q9NS68 423 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RAB21Q9UL25 225 aa12.82□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MDFIC2A0A1B0GVS7 189 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PIP5K1CO60331 668 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CST2P09228 141 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SLC25A47Q6Q0C1 308 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 BTNL3Q6UXE8 466 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 IGFN1Q86VF2 1251 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 LRRC28Q86X40 367 aaPredicted RBP12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ZNF283Q8N7M2 679 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RASSF5Q8WWW0 418 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TLCD1Q96CP7 247 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TXNIPQ9H3M7 391 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RABEP2Q9H5N1 569 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RIMS3Q9UJD0 308 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 KLHL21Q9UJP4 597 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PPP1R3CQ9UQK1 317 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MED31Q9Y3C7 131 aa12.81□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TRAV40A0A0B4J280 105 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CEACAM18A8MTB9 384 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ERLIN1O75477 346 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ZNF205O95201 554 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RPS2P15880 293 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MDH2P40926 338 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 HTR5AP47898 357 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PIN1Q13526 163 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 C1orf94Q6P1W5 598 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MICU2Q8IYU8 434 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TMIGD2Q96BF3 282 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CMBLQ96DG6 245 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms