RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TAS2R43P59537 309 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 RPS21P63220 83 aaKnown RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 SLC38A11Q08AI6 406 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 TCP10Q12799 353 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 NPRL3Q12980 569 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 AQP6Q13520 282 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 UBE2V2Q15819 145 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 CYBRD1Q53TN4 286 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 LRRC73Q5JTD7 316 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 C6orf163Q5TEZ5 329 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 TEX36Q5VZQ5 186 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 SDE2Q6IQ49 451 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 PLET1Q6UQ28 207 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 Q6ZPB1 254 aaPredicted RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 SLC26A11Q86WA9 606 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 ATOH7Q8N100 152 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 NUP93Q8N1F7 819 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 MSANTD4Q8NCY6 345 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 URGCPQ8TCY9 931 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 RAPGEF5Q92565 580 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 MRPL38Q96DV4 380 aaKnown RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 PGAP3Q96FM1 320 aaPredicted RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 SDSLQ96GA7 329 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 ELMO2Q96JJ3 720 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 TSPAN18Q96SJ8 248 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 WDR12Q9GZL7 423 aaKnown RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 CHRNA10Q9GZZ6 450 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 FN3KQ9H479 309 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 RANBP3Q9H6Z4 567 aaPredicted RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 RDH14Q9HBH5 336 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 PRSS16Q9NQE7 514 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAM114A2Q9NRY5 505 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 TAS2R9Q9NYW1 312 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 MIOXQ9UGB7 285 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 WARS2Q9UGM6 360 aaKnown RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 PLECQ15149 4684 aaKnown RBP-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 C2CD3Q4AC94 2353 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 PFASO15067 1338 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 UBN2Q6ZU65 1347 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 A0A075B6Q4 140 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 ANKRD62A6NC57 917 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF705FA8MVS1 300 aaPredicted RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 TNFRSF11BO00300 401 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 MGRN1O60291 552 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 EPOP01588 193 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 C2P06681 752 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 POLBP06746 335 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 AKR1B1P15121 316 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 CD70P32970 193 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 NNMTP40261 264 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR3A1P47881 315 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 SERPINB9P50453 376 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 BDH1Q02338 343 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 CHIT1Q13231 466 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 C1orf61Q13536 156 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 CRYMQ14894 314 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF726P1Q15940 193 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 CLPPQ16740 277 aaPredicted RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 BEND3Q5T5X7 828 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 GPR139Q6DWJ6 353 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 CDC42EP5Q6NZY7 148 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 CNSTQ6PJW8 725 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 AFTPHQ6ULP2 937 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 RANBP3LQ86VV4 465 aaPredicted RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 ERO1BQ86YB8 467 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 SVOPLQ8N434 492 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZFP62Q8NB50 900 aaPredicted RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR6M1Q8NGM8 313 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR2K2Q8NGT1 345 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 GPATCH3Q96I76 525 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 TTC25Q96NG3 672 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 POLR1EQ9GZS1 481 aaKnown RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 IL22Q9GZX6 179 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 GANQ9H2C0 597 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 SUDS3Q9H7L9 328 aaPredicted RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 FN3KRPQ9HA64 309 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 FOLH1BQ9HBA9 442 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 RIC8AQ9NPQ8 531 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 XCL2Q9UBD3 114 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 RCL1Q9Y2P8 373 aaKnown RBP-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 EML6Q6ZMW3 1958 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 E9PCH4 1651 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 TNIKQ9UKE5 1360 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 VPS13DQ5THJ4 4388 aa-2.38□□□□□ -2.79
SNORA40.16-201ENST00000517238 LOC110117498A0A087WWA1 95 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 HSFX4A0A1B0GTS1 333 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 HSFX3A0A1B0GWH4 333 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 TLDC2A0PJX2 215 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 KLRC4-KLRK1H3BQV0 150 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 C19orf84I3L1E1 186 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CHEK1O14757 476 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 SMPD2O60906 423 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 REC8O95072 547 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 FARS2O95363 451 aaKnown RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 PGM3O95394 542 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 KLK3P07288 261 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 SERPINF2P08697 491 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CT45A8P0DMV1 189 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CT45A9P0DMV2 189 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 KITLGP21583 273 aa-2.39□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms