RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 VSX2P58304 361 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 PLP1P60201 277 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 UBE2NP61088 152 aaKnown RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 IRX3P78415 501 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 PITPNAQ00169 270 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 FLI1Q01543 452 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 MXD1Q05195 221 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 PIGHQ14442 188 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 PGGHGQ32M88 737 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 SMUG1Q53HV7 270 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 UBE2UQ5VVX9 321 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 RAET1LQ5VY80 246 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 CENPPQ6IPU0 288 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 GALNT17Q6IS24 598 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 CEMP1Q6PRD7 247 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 SPINT4Q6UDR6 99 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 LRP11Q86VZ4 500 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 CDKL3Q8IVW4 592 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 LGI3Q8N145 548 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 OSR2Q8N2R0 312 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 EID2Q8N6I1 236 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 SPANXA2-OT1Q8N9U9 137 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 HSD17B11Q8NBQ5 300 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 RAB3IL1Q8TBN0 382 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 DCPSQ96C86 337 aaKnown RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 FLYWCH2Q96CP2 140 aaKnown RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 SERPINB12Q96P63 405 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 FMO2Q99518 471 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 TBL1YQ9BQ87 522 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 ROPN1BQ9BZX4 212 aaPredicted RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 EXOSC4Q9NPD3 245 aaKnown RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 COX16Q9P0S2 106 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 SUN2Q9UH99 717 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 CLEC4AQ9UMR7 237 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 SIGLEC9Q9Y336 463 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 IKBKGQ9Y6K9 419 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 DHX57Q6P158 1386 aaKnown RBP1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 AKNAQ7Z591 1439 aa1.05□□□□□ -2.24
RNU1-117P-201ENST00000517041 IGKV3D-11A0A0A0MRZ8 115 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 GLYATL1P3A0A0U1RQE8 302 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 LYRM9A8MSI8 78 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 F6UB75 175 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 SPECC1L-ADORA2AF8WAN1 911 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 DNASE2O00115 360 aaPredicted RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CHMP2AO43633 222 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 FGGP02679 453 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 SERPIND1P05546 499 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 ZNF688P0C7X2 276 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CT45A6P0DMU7 189 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CT45A5P0DMU8 189 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CT45A7P0DMV0 189 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 MAS1LP35410 378 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CCNHP51946 323 aaPredicted RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 ACTR1AP61163 376 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 UBE2HP62256 183 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PRR3P79522 188 aaKnown RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 ZNF616Q08AN1 781 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 ECH1Q13011 328 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PPP1R7Q15435 360 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 TGFBIQ15582 683 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 VPS26BQ4G0F5 336 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CT45A1Q5HYN5 189 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PHYHD1Q5SRE7 291 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 SPECC1LQ69YQ0 1117 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PRMT9Q6P2P2 845 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 FBXW12Q6X9E4 464 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 SLC16A13Q7RTY0 426 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 SNX20Q7Z614 316 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CDR2LQ86X02 465 aaPredicted RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 NBPF5PQ86XG9 351 aaPredicted RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 MMAAQ8IVH4 418 aaKnown RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 MS4A15Q8N5U1 240 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 NECAB1Q8N987 351 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 EIF1ADQ8N9N8 165 aaKnown RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 LINC00304Q8N9R0 145 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 ST20-AS1Q8NBB2 130 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 OR2L3Q8NG85 312 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 OR4K5Q8NGD3 323 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 OR1L6Q8NGR2 347 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 CT45A3Q8NHU0 189 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PLPPR1Q8TBJ4 325 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PIFOQ8TCI5 191 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 NT5C3BQ969T7 300 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PTX4Q96A99 478 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 SLC25A46Q96AG3 418 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 DNAJC1Q96KC8 554 aaKnown RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 PKIBQ9C010 78 aa1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 MRPS18BQ9Y676 258 aaKnown RBP1.04□□□□□ -2.24
RNU1-117P-201ENST00000517041 KIF26AQ9ULI4 1882 aaPredicted RBP1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 IGHV3OR16-8A0A075B7F1 116 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 IGHV7-4-1A0A0J9YVY3 117 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 KIR2DS1A0A191URI9 304 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 A6NDN8 102 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 H0Y8G0 127 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 CHST10O43529 356 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 DPM1O60762 260 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 CLPXO76031 633 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 SLC22A5O76082 557 aa1.03□□□□□ -2.24
RNU1-117P-201ENST00000517041 SEMA3DO95025 777 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms