RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ERLIN2O94905 339 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 GJB5O95377 273 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 THY1P04216 161 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 STSP08842 583 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 IGHV1-2P23083 117 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 CD82P27701 267 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 RORAP35398 523 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TNFSF9P41273 254 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 KIR2DS2P43631 304 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TFPI2P48307 235 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TMED10P49755 219 aaKnown RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 YWHAEP62258 255 aaKnown RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 RPL32P62910 135 aaKnown RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 ERVK-25P63136 954 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 DYNLL1P63167 89 aaKnown RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 SELENBP1Q13228 472 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ARL6IP1Q15041 203 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 NCF4Q15080 339 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 SYCP1Q15431 976 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 PGGHGQ32M88 737 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ZNF829Q3KNS6 432 aaPredicted RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 PARP15Q460N3 678 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 SLC22A6Q4U2R8 563 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 OR5M10Q6IEU7 315 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ULK3Q6PHR2 472 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 PLA2G4DQ86XP0 818 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 HIPK1Q86Z02 1210 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 SLC22A18ASQ8N1D0 253 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TCAIMQ8N3R3 496 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TTC29Q8NA56 475 aaPredicted RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 OR56B4Q8NH76 319 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 NAT6Q93015 286 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 PSMG2Q969U7 264 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TMIGD2Q96BF3 282 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 C9orf72Q96LT7 481 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TBX15Q96SF7 602 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ATP5SQ99766 215 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 FAIM2Q9BWQ8 316 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ROGDIQ9GZN7 287 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 OR51M1Q9H341 326 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 SLC38A10Q9HBR0 1119 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ADAP2Q9NPF8 381 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 DYRK4Q9NR20 520 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ABCB10Q9NRK6 738 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 CHMP5Q9NZZ3 219 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 DPM3Q9P2X0 92 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 UXTQ9UBK9 157 aaPredicted RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 PRODH2Q9UF12 536 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 DDX19BQ9UMR2 479 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 COL4A1P02462 1669 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 AKAP11Q9UKA4 1901 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ZBED9Q6R2W3 1325 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ZNF532Q9HCE3 1301 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 LAMB2P55268 1798 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 TRAV6A0A075B6T7 132 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SMIM28A0A1B0GU29 152 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 TMEM120BA0PK00 339 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 C12orf71A8MTZ7 269 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 DCTN6O00399 190 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 AIREO43918 545 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SLC2A10O95528 541 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 STAMBPO95630 424 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 HLA-HP01893 362 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 CLTAP09496 248 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 TBPP20226 339 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 NPR2P20594 1047 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 BCKDHBP21953 392 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ADORA2BP29275 332 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SPAM1P38567 509 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 NPBWR2P48146 333 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ARRB1P49407 418 aaPredicted RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 SSR4P51571 173 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 IST1P53990 364 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 GPX6P59796 221 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 CCDC173Q0VFZ6 552 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 CDH17Q12864 832 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SLAQ13239 276 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SLC10A1Q14973 349 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ABRAXAS2Q15018 415 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SF3A2Q15428 464 aaKnown RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 CYTH1Q15438 398 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 USF2Q15853 346 aaPredicted RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 OR2G6Q5TZ20 316 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SLC22A10Q63ZE4 541 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SPESP1Q6UW49 350 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 CXCL17Q6UXB2 119 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 PAMR1Q6UXH9 720 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 MRPL21Q7Z2W9 205 aaKnown RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 COMTD1Q86VU5 262 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SPATA24Q86W54 205 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ITPRIPQ8IWB1 547 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 NRMQ8IXM6 262 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ST13P4Q8IZP2 240 aaPredicted RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 CMTM8Q8IZV2 173 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SYCE1Q8N0S2 351 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 LIX1Q8N485 282 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ASCC1Q8N9N2 400 aaKnown RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 FNDC5Q8NAU1 212 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 INO80EQ8NBZ0 244 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms