RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 AQP6Q13520 282 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 SMN1Q16637 294 aaKnown RBP18.34■□□□□ 0.53
LSM6-207ENST00000515311 LAIR2Q6ISS4 152 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 B3GLCTQ6Y288 498 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 ERI1Q8IV48 349 aaKnown RBP18.34■□□□□ 0.53
LSM6-207ENST00000515311 FBXO17Q96EF6 278 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 CNN2Q99439 309 aaKnown RBP18.34■□□□□ 0.53
LSM6-207ENST00000515311 WDR76Q9H967 626 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 CYB5R1Q9UHQ9 305 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 RPL36Q9Y3U8 105 aaKnown RBP18.34■□□□□ 0.53
LSM6-207ENST00000515311 GCN1Q92616 2671 aaKnown RBP18.33■□□□□ 0.53
LSM6-207ENST00000515311 WNT11O96014 354 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 DBTP11182 482 aaKnown RBP18.33■□□□□ 0.52
LSM6-207ENST00000515311 ARR3P36575 388 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 NUDT6P53370 316 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 CXCR4P61073 352 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 KRT80Q6KB66 452 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 SLC16A9Q7RTY1 509 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.33■□□□□ 0.52
LSM6-207ENST00000515311 MUCL1Q96DR8 90 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 RNFT2Q96EX2 444 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 ADGRL4Q9HBW9 690 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 PLCXD1Q9NUJ7 323 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 MRPS18AQ9NVS2 196 aaKnown RBP18.33■□□□□ 0.52
LSM6-207ENST00000515311 B3GNT2Q9NY97 397 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 ASH2LQ9UBL3 628 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 NDRG3Q9UGV2 375 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 POLR1DQ9Y2S0 133 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 SLC25A15Q9Y619 301 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 LHFPL6Q9Y693 200 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 ADGRG4Q8IZF6 3080 aa18.33■□□□□ 0.52
LSM6-207ENST00000515311 ZNF503-AS2A6NEH8 195 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 ZNF593O00488 134 aaPredicted RBP18.32■□□□□ 0.52
LSM6-207ENST00000515311 SELENOFO60613 162 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 TMCC2O75069 709 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 HLA-HP01893 362 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 MMP7P09237 267 aaPredicted RBP18.32■□□□□ 0.52
LSM6-207ENST00000515311 SBK2P0C263 348 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 CAPZA2P47755 286 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 CSNK2BP67870 215 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 MED21Q13503 144 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 TAB1Q15750 504 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 C6orf141Q5SZD1 244 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 OTPQ5XKR4 325 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 TMEM53Q6P2H8 277 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 SHFQ7M4L6 423 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 FAM169BQ8N8A8 192 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 OR52N5Q8NH56 324 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 CDADC1Q9BWV3 514 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 YIPF3Q9GZM5 350 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 CCNB1IP1Q9NPC3 277 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 TIMM10BQ9Y5J6 103 aa18.32■□□□□ 0.52
LSM6-207ENST00000515311 ANKHD1Q8IWZ3 2542 aaKnown RBP18.32■□□□□ 0.52
LSM6-207ENST00000515311 SPARCP09486 303 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 CD79AP11912 226 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 IGFBP2P18065 325 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 NAA10P41227 235 aaPredicted RBP18.31■□□□□ 0.52
LSM6-207ENST00000515311 SLC15A1P46059 708 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 HIST1H3AP68431 136 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 SCRN3Q0VDG4 424 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 PPA1Q15181 289 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 GSG1Q2KHT4 349 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 HIST2H3PS2Q5TEC6 136 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 SLC18B1Q6NT16 456 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 HIST2H3AQ71DI3 136 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 ZNF454Q8N9F8 522 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 OR51G2Q8NGK0 314 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 OR6N2Q8NGY6 317 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 FGFBP3Q8TAT2 258 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 MNTQ99583 582 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 MED18Q9BUE0 208 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 AMBNQ9NP70 447 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 FBXL3Q9UKT7 428 aa18.31■□□□□ 0.52
LSM6-207ENST00000515311 IRGMA1A4Y4 181 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 TUBAL3A6NHL2 446 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 MRPL3P09001 348 aaKnown RBP18.3■□□□□ 0.52
LSM6-207ENST00000515311 PSKH1P11801 424 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 ZNF32P17041 273 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 ATP6V1E1P36543 226 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 RAB1AP62820 205 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 TUBA1BP68363 451 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 TUBA4AP68366 448 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 RAB40BQ12829 278 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 KLHL22Q53GT1 634 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 TUBA1AQ71U36 451 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 DPY19L4Q7Z388 723 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 MDP1Q86V88 176 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 CDC20BQ86Y33 519 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 GJC3Q8NFK1 279 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 OR2AJ1Q8NGZ0 328 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 OTOSQ8NHW6 89 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 WFIKKN1Q96NZ8 548 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 OR2H1Q9GZK4 316 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 UBAP1Q9NZ09 502 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 EXOGQ9Y2C4 368 aaKnown RBP18.3■□□□□ 0.52
LSM6-207ENST00000515311 PCDHGB1Q9Y5G3 927 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 TMEM14AQ9Y6G1 99 aa18.3■□□□□ 0.52
LSM6-207ENST00000515311 A0A1W2PR80 420 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 J3QRE1 110 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 RAB36O95755 333 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms