RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ABHD12BQ7Z5M8 362 aaPredicted RBP2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF578Q96N58 590 aaPredicted RBP2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 NDFIP1Q9BT67 221 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 PITPNC1Q9UKF7 332 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 MAPK8IP3Q9UPT6 1336 aa2.96□□□□□ -1.93
HMGCS1-207ENST00000514610 AKNAQ7Z591 1439 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 COL4A4P53420 1690 aaPredicted RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 IGLV4-60A0A075B6I1 120 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 A0A1W2PP18 115 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNF705GA8MUZ8 300 aaPredicted RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 AIM2O14862 343 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 NUPL2O15504 423 aaKnown RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 CHST1O43916 411 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 HLA-DPB1P04440 258 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 MRPL3P09001 348 aaKnown RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 DCKP27707 260 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 FOXN2P32314 431 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 NAMPTP43490 491 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 TCP10Q12799 353 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 SELENBP1Q13228 472 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 IDI1Q13907 227 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 C9orf135Q5VTT2 229 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 RIMKLAQ8IXN7 391 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 IQCKQ8N0W5 287 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 ABHD3Q8WU67 409 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 SLC38A4Q969I6 547 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 PLIN2Q99541 437 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 SAV1Q9H4B6 383 aaPredicted RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 UBE2ZQ9H832 354 aaPredicted RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 VANGL2Q9ULK5 521 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 TMED5Q9Y3A6 229 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 SLIT3O75094 1523 aa2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 GPATCH8Q9UKJ3 1502 aaKnown RBP2.96□□□□□ -1.94
HMGCS1-207ENST00000514610 SMCO3A2RU48 225 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 C9JVG2 144 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 KLHL41O60662 606 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 WBP4O75554 376 aaKnown RBP2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 FTH1P02794 183 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 RHOXF2BP0C7M4 288 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 CSNK1EP49674 416 aaKnown RBP2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 C22orf42Q6IC83 251 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 REEP3Q6NUK4 255 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 TMEM205Q6UW68 189 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 SLC16A14Q7RTX9 510 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 OR2A1Q8NGT9 310 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 OR2L8Q8NGY9 312 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 FRZBQ92765 325 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 TM4SF18Q96CE8 201 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 NEURL3Q96EH8 262 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 PANX1Q96RD7 426 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 SYNDIG1Q9H7V2 258 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 GPATCH2LQ9NWQ4 482 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 HRASLS2Q9NWW9 162 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 UXTQ9UBK9 157 aaPredicted RBP2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 KCNE3Q9Y6H6 103 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 PCM1Q15154 2024 aa2.95□□□□□ -1.94
HMGCS1-207ENST00000514610 TRBV11-1A0A0K0K1C0 115 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 SIRPB1O00241 398 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 CCNB1P14635 433 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 RAB3BP20337 219 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 CEACAM3P40198 252 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 PMELP40967 661 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 SLC1A1P43005 524 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 CRISP1P54107 249 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 RAB10P61026 200 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 LOXL1Q08397 574 aaPredicted RBP2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 RCAN2Q14206 197 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 OR7A5Q15622 319 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 ABCA11PQ4W5N1 156 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 CARD17Q5XLA6 110 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 WDR86Q86TI4 376 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 CMTM1Q8IZ96 169 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 H1FOOQ8IZA3 346 aaPredicted RBP2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 TTC5Q8N0Z6 440 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 OR4A4PQ8NGN8 299 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 MRGPRFQ96AM1 343 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 SEH1LQ96EE3 360 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 COL21A1Q96P44 957 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 PARP12Q9H0J9 701 aaKnown RBP2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 TMEM9BQ9NQ34 198 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 SAMSN1Q9NSI8 373 aaKnown RBP2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNF355PQ9NSJ1 428 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 LGALS13Q9UHV8 139 aa2.94□□□□□ -1.94
HMGCS1-207ENST00000514610 DOCK9Q9BZ29 2069 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 NINLQ9Y2I6 1382 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 CTAGE15A4D2H0 777 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 TCP11X1B4DZS4 312 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 LSM1O15116 133 aaKnown RBP2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 B4GALT5O43286 388 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 SLC25A14O95258 325 aaPredicted RBP2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 CISD3P0C7P0 127 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 PSMC3P17980 439 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 F2RP25116 425 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 RRM2P31350 389 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 ARG2P78540 354 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 THEM4Q5T1C6 240 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 METTL21CQ5VZV1 264 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 NANOGP8Q6NSW7 305 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 MBOAT1Q6ZNC8 495 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms