RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 USP43Q70EL4 1123 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 CXXC5Q7LFL8 322 aaKnown RBP7.32□□□□□ -1.24
CCL28-204ENST00000514421 BHLHA15Q7RTS1 189 aaPredicted RBP7.32□□□□□ -1.24
CCL28-204ENST00000514421 SSX8Q7RTT4 187 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 ABHD12BQ7Z5M8 362 aaPredicted RBP7.32□□□□□ -1.24
CCL28-204ENST00000514421 EGFL6Q8IUX8 553 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 CROCCP3Q8IVE0 287 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 CPOQ8IVL8 374 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 PHC2Q8IXK0 858 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 LRRC17Q8N6Y2 441 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 ZNF433Q8N7K0 673 aaPredicted RBP7.32□□□□□ -1.24
CCL28-204ENST00000514421 LRRC75AQ8NAA5 344 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 NDNFQ8TB73 568 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 RPL3LQ92901 407 aaKnown RBP7.32□□□□□ -1.24
CCL28-204ENST00000514421 PLEKHA8Q96JA3 519 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 TNFRSF13CQ96RJ3 184 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 LINC00470Q9BZP3 86 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 NMNAT2Q9BZQ4 307 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 ACTR6Q9GZN1 396 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 SLCO5A1Q9H2Y9 848 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 NRIP3Q9NQ35 241 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 SLC7A10Q9NS82 523 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 TAS2R16Q9NYV7 291 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 TAS2R5Q9NYW4 299 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 CCDC59Q9P031 241 aaKnown RBP7.32□□□□□ -1.24
CCL28-204ENST00000514421 B3GAT1Q9P2W7 334 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 MALT1Q9UDY8 824 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 KLHL21Q9UJP4 597 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 RCE1Q9Y256 329 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 NOX1Q9Y5S8 564 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 PMF1-BGLAPU3KQ54 211 aa7.32□□□□□ -1.24
CCL28-204ENST00000514421 TRAV27A0A087WT01 109 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 CIB4A0PJX0 185 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 SLC22A31A6NKX4 558 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 RIIAD1A6NNX1 92 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 BLOC1S5-TXNDC5H3BN57 136 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 RNF13O43567 381 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 TRAF3IP2O43734 574 aaPredicted RBP7.31□□□□□ -1.24
CCL28-204ENST00000514421 AKAP8O43823 692 aaKnown RBP7.31□□□□□ -1.24
CCL28-204ENST00000514421 SLC43A1O75387 559 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 LYZL6O75951 148 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 KRT33AO76009 404 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 ZNF432O94892 652 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 SLC2A10O95528 541 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 THBDP07204 575 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 HLA-DOBP13765 273 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 MYL12AP19105 171 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 COX5AP20674 150 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 CRYGSP22914 178 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 MPGP29372 298 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 CCKARP32238 428 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 CRYBB2P43320 205 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 CAPZA2P47755 286 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 SERPINB10P48595 397 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 SELENOPP49908 381 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 VBP1P61758 197 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 NCS1P62166 190 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 TGFBR3Q03167 851 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 POU4F2Q12837 409 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 GPR50Q13585 617 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 MED22Q15528 200 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 TSC22D1Q15714 1073 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 DGUOKQ16854 277 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 TIMM23BQ5SRD1 257 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 C1QTNF12Q5T7M4 302 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 FAM122BQ7Z309 247 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 SLC37A3Q8NCC5 494 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 BBS1Q8NFJ9 593 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 KBTBD8Q8NFY9 601 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 S100PBPQ96BU1 408 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 MUCL1Q96DR8 90 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 ZC3HAV1LQ96H79 300 aaKnown RBP7.31□□□□□ -1.24
CCL28-204ENST00000514421 TXNDC15Q96J42 360 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 ADAD1Q96M93 576 aaKnown RBP7.31□□□□□ -1.24
CCL28-204ENST00000514421 TEAD3Q99594 435 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 COQ7Q99807 217 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 IFT27Q9BW83 186 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 PLGRKTQ9HBL7 147 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 NGBQ9NPG2 151 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 ERVK13-1Q9NX77 482 aa7.31□□□□□ -1.24
CCL28-204ENST00000514421 CAB39Q9Y376 341 aaPredicted RBP7.31□□□□□ -1.24
CCL28-204ENST00000514421 SF3B6Q9Y3B4 125 aaKnown RBP7.31□□□□□ -1.24
CCL28-204ENST00000514421 CADP27708 2225 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 SLC35F4A4IF30 521 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 ZNF587BE7ETH6 402 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 PRR23D1E9PI22 279 aaPredicted RBP7.3□□□□□ -1.24
CCL28-204ENST00000514421 C11orf98E9PRG8 122 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 MYL12BO14950 172 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 UPK3AO75631 287 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 IFNGP01579 166 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 HRGP04196 525 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 ITGA5P08648 1049 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 PRR23D2P0DMB1 279 aaPredicted RBP7.3□□□□□ -1.24
CCL28-204ENST00000514421 IFNGR1P15260 489 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 ZNF3P17036 446 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 CD53P19397 219 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 FGF9P31371 208 aaPredicted RBP7.3□□□□□ -1.24
CCL28-204ENST00000514421 GABRA5P31644 462 aa7.3□□□□□ -1.24
CCL28-204ENST00000514421 AQP2P41181 271 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms