RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ARHGAP19Q14CB8 494 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 KCTD21Q4G0X4 260 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 DEFB134Q4QY38 66 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 MPV17L2Q567V2 206 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 CCNJQ5T5M9 372 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 WDR59Q6PJI9 974 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 C16orf47Q6ZP98 133 aaPredicted RBP0.61□□□□□ -2.31
PDGFC-208ENST00000512711 PEX26Q7Z412 305 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 TMEM135Q86UB9 458 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF101Q8IZC7 436 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 METTL13Q8N6R0 699 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 ZFP41Q8N8Y5 198 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 TTLQ8NG68 377 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 OR2T34Q8NGX1 318 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 PTX4Q96A99 478 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 MRGPRFQ96AM1 343 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 TMEM159Q96B96 161 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 PANX2Q96RD6 677 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 RBBP8Q99708 897 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 RNF14Q9UBS8 474 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 DENND4AQ7Z401 1863 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 C4orf51C9J302 202 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 NDUFB10O96000 172 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CALM1P0DP23 149 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CALM2P0DP24 149 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CALM3P0DP25 149 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 KRT13P13646 458 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 TCP1P17987 556 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 WARSP23381 471 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CEACAM3P40198 252 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 FBXW4P57775 412 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 PPP1CBP62140 327 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CRADDP78560 199 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CLINT1Q14677 625 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 ZSCAN30Q86W11 494 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 OR10R2Q8NGX6 335 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 SCFD1Q8WVM8 642 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CCDC47Q96A33 483 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 PIK3IP1Q96FE7 263 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 ZFP3Q96NJ6 502 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 RBM14Q96PK6 669 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 FMO2Q99518 471 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 SH3GL1Q99961 368 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 THUMPD2Q9BTF0 503 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 PARD6BQ9BYG5 372 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 C1orf198Q9H425 327 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 CWH43Q9H720 699 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 NIPAL2Q9H841 368 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 EXOSC4Q9NPD3 245 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 KCNJ16Q9NPI9 418 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 FAM49BQ9NUQ9 324 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 C21orf62Q9NYP8 219 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 PTBP2Q9UKA9 531 aaKnown RBP0.6□□□□□ -2.31
PDGFC-208ENST00000512711 RAB23Q9ULC3 237 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 HYOU1Q9Y4L1 999 aa0.6□□□□□ -2.31
PDGFC-208ENST00000512711 GPRASP1Q5JY77 1395 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 IGLV1-36A0A0B4J1U3 117 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 CEACAM18A8MTB9 384 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 ERLIN2O94905 339 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 CYB5R3P00387 301 aaPredicted RBP0.59□□□□□ -2.31
PDGFC-208ENST00000512711 LHBP01229 141 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 HEXBP07686 556 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 PFN1P07737 140 aaKnown RBP0.59□□□□□ -2.31
PDGFC-208ENST00000512711 IQCF3P0C7M6 154 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 OR5H8P0DN80 308 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF35P13682 527 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 RAB3BP20337 219 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 HSD17B2P37059 387 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 GZMMP51124 257 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 RND2P52198 227 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 PRMT2P55345 433 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 MXD1Q05195 221 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 PPIL2Q13356 520 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 PDK4Q16654 411 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 SLC36A3Q495N2 470 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 NADK2Q4G0N4 442 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 ARL10Q8N8L6 244 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 SENP8Q96LD8 212 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 CNN2Q99439 309 aaKnown RBP0.59□□□□□ -2.31
PDGFC-208ENST00000512711 KCTD14Q9BQ13 255 aaPredicted RBP0.59□□□□□ -2.31
PDGFC-208ENST00000512711 GGTLC1Q9BX51 225 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 ZSCAN16Q9H4T2 348 aaPredicted RBP0.59□□□□□ -2.31
PDGFC-208ENST00000512711 NEK6Q9HC98 313 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 TMED5Q9Y3A6 229 aa0.59□□□□□ -2.31
PDGFC-208ENST00000512711 KIAA1671Q9BY89 1806 aa0.59□□□□□ -2.32
PDGFC-208ENST00000512711 FLG2Q5D862 2391 aaPredicted RBP0.59□□□□□ -2.32
PDGFC-208ENST00000512711 BAZ2AQ9UIF9 1905 aaKnown RBP0.58□□□□□ -2.32
PDGFC-208ENST00000512711 A0A1B0GWJ7 208 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 MBLAC1A4D2B0 266 aaPredicted RBP0.58□□□□□ -2.32
PDGFC-208ENST00000512711 SDHAF1A6NFY7 115 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 L7N2F9 121 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 DPM1O60762 260 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 IFNB1P01574 187 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 CD3GP09693 182 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 CCNB1P14635 433 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 RPA2P15927 270 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 CD1CP29017 333 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 CASP14P31944 242 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 VHLP40337 213 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms