RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 IGKV3-15P01624 115 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 HLA-HP01893 362 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 MT-ND5P03915 603 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 SERPINA5P05154 406 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 OSMP13725 252 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 TUBG1P23258 451 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 APOBEC3AP31941 199 aaPredicted RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 RAD52P43351 418 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 GIPRP48546 466 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 GDI2P50395 445 aaKnown RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 FOXG1P55316 489 aaPredicted RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 BPIFB3P59826 476 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 ACTR3P61158 418 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 LSM6P62312 80 aaKnown RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 ESRRGP62508 458 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 LSM11P83369 360 aaKnown RBP eCLIP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 NAAAQ02083 359 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 PIGFQ07326 219 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 AQP6Q13520 282 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 ETFDHQ16134 617 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 CLEC12AQ5QGZ9 265 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 FAM27BQ5VT28 67 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF770Q6IQ21 691 aaPredicted RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 LEG1Q6P5S2 330 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 SLC25A47Q6Q0C1 308 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 LINGO2Q7L985 606 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 FAM122BQ7Z309 247 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 MUC15Q8N387 334 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 LNX2Q8N448 690 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 LRRC18Q8N456 261 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 PROKR2Q8NFJ6 384 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 OR52E2Q8NGJ4 325 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 OR2AJ1Q8NGZ0 328 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 OR4K13Q8NH42 304 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 RASD2Q96D21 266 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 MED30Q96HR3 178 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 RBM14Q96PK6 669 aaKnown RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 AIFM2Q9BRQ8 373 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 SYT4Q9H2B2 425 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 VCXQ9H320 206 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 PLEKHF2Q9H8W4 249 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 ELOVL3Q9HB03 270 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 TUBG2Q9NRH3 451 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 KRT84Q9NSB2 600 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 VSX1Q9NZR4 365 aaPredicted RBP6.51□□□□□ -1.37
NR1I3-231ENST00000512340 IL20RAQ9UHF4 553 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 KCNG2Q9UJ96 466 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 PLEKHA6Q9Y2H5 1048 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 CMAHPQ9Y471 501 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 FKBP7Q9Y680 259 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 CSMD2Q7Z408 3487 aa6.51□□□□□ -1.37
NR1I3-231ENST00000512340 IGHV1-18A0A0C4DH31 117 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 TRIM64A6NGJ6 449 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 TRIM64BA6NI03 449 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SULT1B1O43704 296 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SEC14L2O76054 403 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 IGLV1-44P01699 117 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 CECR9P0C854 216 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 HIST1H1CP16403 213 aaKnown RBP6.5□□□□□ -1.37
NR1I3-231ENST00000512340 FMO3P31513 532 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 GRK5P34947 590 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RGS6P49758 472 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 ART1P52961 327 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RAD23AP54725 363 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SNRPD2P62316 118 aaKnown RBP6.5□□□□□ -1.37
NR1I3-231ENST00000512340 ECH1Q13011 328 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 DAG1Q14118 895 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RAB35Q15286 201 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 DEFB113Q30KQ7 82 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 MESTQ5EB52 335 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 CEP78Q5JTW2 689 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 PHYHD1Q5SRE7 291 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SLC35F1Q5T1Q4 408 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SHEQ5VZ18 495 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 CORO6Q6QEF8 472 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 THSD4Q6ZMP0 1018 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SKA3Q8IX90 412 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 LRRC75A-AS1Q8N1F1 130 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 PARP8Q8N3A8 854 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SLC30A7Q8NEW0 376 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 NUP37Q8NFH4 326 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 GJC3Q8NFK1 279 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 C11orf40Q8WZ69 217 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 OTULINQ96BN8 352 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF837Q96EG3 531 aaPredicted RBP6.5□□□□□ -1.37
NR1I3-231ENST00000512340 NMNAT3Q96T66 252 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 FOXC2Q99958 501 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RBM4BQ9BQ04 359 aaKnown RBP6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RBM4Q9BWF3 364 aaKnown RBP6.5□□□□□ -1.37
NR1I3-231ENST00000512340 BCL2L14Q9BZR8 327 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 NUAK2Q9H093 628 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RACGAP1Q9H0H5 632 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF442Q9H7R0 627 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SP140LQ9H930 580 aa6.5□□□□□ -1.37
NR1I3-231ENST00000512340 SRA1Q9HD15 236 aaKnown RBP6.5□□□□□ -1.37
NR1I3-231ENST00000512340 RPRD1BQ9NQG5 326 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms