RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ABLIM2Q6H8Q1 611 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 RPL22L1Q6P5R6 122 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 KLHL24Q6TFL4 600 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 GPR137CQ8N3F9 429 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 MS4A15Q8N5U1 240 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 OTOSQ8NHW6 89 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 SMAP2Q8WU79 429 aaPredicted RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 ROBO4Q8WZ75 1007 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 RPL3LQ92901 407 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 TMEM203Q969S6 136 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 MARCH7Q9H992 704 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 PARPBPQ9NWS1 579 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 GLTPQ9NZD2 209 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 GTF2A1LQ9UNN4 478 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 COPS3Q9UNS2 423 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 SPEGQ15772 3267 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 DNAJC13O75165 2243 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 TRBV2A0A0J9YWF9 115 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 TRDV1A0A1B0GX56 115 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 OR6C65A6NJZ3 312 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ZNF814B7Z6K7 855 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 H0YC42 278 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 PSMD9O00233 223 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 CASKO14936 926 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 GPRIN2O60269 458 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 CYTIPO60759 359 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 RAMP1O60894 148 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 MRPL33O75394 65 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 AQP8O94778 261 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ZNF432O94892 652 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 GPANK1O95872 356 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 H2BFMP0C1H6 154 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 OR8G3PP0DMU2 310 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 GALP22466 123 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 MAPK3P27361 379 aaPredicted RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 PCSK6P29122 969 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 S100A5P33763 92 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 EIF2S3P41091 472 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 TGM4P49221 684 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 GDI2P50395 445 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 CLDN18P56856 261 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 TMPRSS3P57727 454 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 SIRPAP78324 504 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 DBPQ10586 325 aaPredicted RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 LSAMPQ13449 338 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 RNPS1Q15287 305 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 SF3B4Q15427 424 aaKnown RBP eCLIP7.17□□□□□ -1.26
HTT-209ENST00000512068 ETFDHQ16134 617 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ZNF829Q3KNS6 432 aaPredicted RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 C22orf42Q6IC83 251 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 TRILQ7L0X0 811 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 SSX6Q7RTT6 188 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 SPACA3Q8IXA5 215 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 SLC26A10Q8NG04 563 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 OR52N5Q8NH56 324 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ZNRF4Q8WWF5 429 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 THRSPQ92748 146 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 MCHR2Q969V1 340 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 SARAFQ96BY9 339 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 SMIM19Q96E16 107 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 PELI1Q96FA3 418 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ZNF845Q96IR2 970 aaPredicted RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 ADGRG7Q96K78 797 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 CEP19Q96LK0 163 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 OR2M2Q96R28 347 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 CENPOQ9BU64 300 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 RBM24Q9BX46 236 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 MRPL13Q9BYD1 178 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 C1orf198Q9H425 327 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ZDHHC11Q9H8X9 412 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 ACOXLQ9NUZ1 547 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 TXNL4BQ9NX01 149 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 GALNT8Q9NY28 637 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 CCDC59Q9P031 241 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 CRNNQ9UBG3 495 aaPredicted RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 NOSIPQ9Y314 301 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 FLVCR1Q9Y5Y0 555 aa7.17□□□□□ -1.26
HTT-209ENST00000512068 TNRC6AQ8NDV7 1962 aaKnown RBP7.17□□□□□ -1.26
HTT-209ENST00000512068 ALPK2Q86TB3 2170 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CD8B2A6NJW9 211 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 GABRPO00591 440 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 DHHO43323 396 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 PLPP2O43688 288 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF254O75437 659 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 GPX5O75715 221 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ARL6IP5O75915 188 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CLPXO76031 633 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CRYABP02511 175 aaKnown RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 GAAP10253 952 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CD8BP10966 210 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 KLK2P20151 261 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ALOX5APP20292 161 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 NPR2P20594 1047 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 MSR1P21757 451 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 PAX7P23759 505 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 HSD11B1P28845 292 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 PSMB10P40306 273 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CRYBB2P43320 205 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 SELENOPP49908 381 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms