RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 SRMP19623 302 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 F2RP25116 425 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 NUDT1P36639 197 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 GPX4P36969 197 aaPredicted RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 NUP62P37198 522 aaPredicted RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 CTRLP40313 264 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 CSNK1DP48730 415 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 GNB2P62879 340 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 NDPQ00604 133 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 MXD1Q05195 221 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 IFT88Q13099 833 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 DAZ2Q13117 558 aaKnown RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 TTLL9Q3SXZ7 439 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 PTPN20Q4JDL3 420 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 CT45A1Q5HYN5 189 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 COX15Q7KZN9 410 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 ABHD13Q7L211 337 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 STRADAQ7RTN6 431 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 APRG1Q8IVJ8 170 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 CMTM8Q8IZV2 173 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 OR5T3Q8NGG3 340 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 CT45A3Q8NHU0 189 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 MYDGFQ969H8 173 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 C9orf72Q96LT7 481 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 NRTNQ99748 197 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 MRPL37Q9BZE1 423 aaKnown RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 PDFQ9HBH1 243 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 MRM3Q9HC36 420 aaKnown RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 LZTFL1Q9NQ48 299 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 DAZ3Q9NR90 486 aaKnown RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 DDX19BQ9UMR2 479 aa3.27□□□□□ -1.89
MBD4-209ENST00000511009 MRPS18BQ9Y676 258 aaKnown RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 COL2A1P02458 1487 aaPredicted RBP3.27□□□□□ -1.89
MBD4-209ENST00000511009 NFASCO94856 1347 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 TRIM49D1C9J1S8 452 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 BOLA2-SMG1P6H3BVE0 249 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 RAD51CO43502 376 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 RAB3DO95716 219 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 BGLAPP02818 100 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 FABP3P05413 133 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ZNF19P17023 458 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 MAS1LP35410 378 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 NCBP2P52298 156 aaKnown RBP eCLIP3.26□□□□□ -1.89
MBD4-209ENST00000511009 PSMD4P55036 377 aaKnown RBP3.26□□□□□ -1.89
MBD4-209ENST00000511009 WNT4P56705 351 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 CLDN18P56856 261 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 CARD18P57730 90 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ZNF33AQ06730 810 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 PSG7Q13046 419 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 STK38Q15208 465 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 TRMT5Q32P41 509 aaKnown RBP3.26□□□□□ -1.89
MBD4-209ENST00000511009 THEM4Q5T1C6 240 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ZNF493Q6ZR52 646 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ZNF621Q6ZSS3 439 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ZNF547Q8IVP9 402 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 MYOCDQ8IZQ8 938 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 LRRC75AQ8NAA5 344 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 OR56A4Q8NGH8 313 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ACTRT1Q8TDG2 376 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 PIH1D2Q8WWB5 315 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ZNF707Q96C28 371 aaPredicted RBP3.26□□□□□ -1.89
MBD4-209ENST00000511009 SLC35E1Q96K37 410 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 CFAP53Q96M91 514 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 CSPG4P5Q96PW8 444 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 NXF3Q9H4D5 531 aaKnown RBP3.26□□□□□ -1.89
MBD4-209ENST00000511009 TMEM38AQ9H6F2 299 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 TDRD3Q9H7E2 651 aaKnown RBP3.26□□□□□ -1.89
MBD4-209ENST00000511009 MYOZ2Q9NPC6 264 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ACP6Q9NPH0 428 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 TMEM9BQ9NQ34 198 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 ST3GAL6Q9Y274 331 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 FANCD2Q9BXW9 1451 aa3.26□□□□□ -1.89
MBD4-209ENST00000511009 MROH2BQ7Z745 1585 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 KIF21AQ7Z4S6 1674 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 TSPAN11A1L157 253 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 A6NDX4 124 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 PLPP1O14494 284 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 SIVA1O15304 175 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 TRAF3IP2O43734 574 aaPredicted RBP3.25□□□□□ -1.89
MBD4-209ENST00000511009 SUPT3HO75486 399 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 TPM1P09493 284 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 CTRB1P17538 263 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 GGT1P19440 569 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 U2AF2P26368 475 aaKnown RBP eCLIP3.25□□□□□ -1.89
MBD4-209ENST00000511009 LONP1P36776 959 aaKnown RBP3.25□□□□□ -1.89
MBD4-209ENST00000511009 RFC3P40938 356 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 GPR1P46091 355 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 SLC7A9P82251 487 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 GGTLC2Q14390 218 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 PON3Q15166 354 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 PSG5Q15238 335 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 ZNF726P1Q15940 193 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 TPTE2P1Q5T6R2 138 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 UBE2UQ5VVX9 321 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 GPR107Q5VW38 600 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 SPECC1LQ69YQ0 1117 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 ULK3Q6PHR2 472 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 C12orf54Q6X4T0 127 aa3.25□□□□□ -1.89
MBD4-209ENST00000511009 TEX43Q6ZNM6 134 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms