RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ANKUB1A6NFN9 424 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 SULT1C2O00338 296 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 MPZL1O95297 269 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 WNT11O96014 354 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 CFDP00746 253 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 CD3DP04234 171 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 IGFBP3P17936 291 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 C17orf67Q0P5P2 114 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 ZP4Q12836 540 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 GLYATL3Q5SZD4 288 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 STEAP1BQ6NZ63 245 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 COMMD7Q86VX2 200 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 OR6M1Q8NGM8 313 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 OR8S1Q8NH09 359 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 SLC25A28Q96A46 364 aa16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 PRMT8Q9NR22 394 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 MRPS17Q9Y2R5 130 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-228ENST00000509552 IGHV3-20A0A0C4DH32 117 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 A0A1W2PPC1 479 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 IL11P20809 199 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 OR7A5Q15622 319 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 LRFN4Q6PJG9 635 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 ZNF627Q7L945 461 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 GPX8Q8TED1 209 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 GSX2Q9BZM3 304 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 SRPK3Q9UPE1 567 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 SPAG17Q6Q759 2223 aa16.08■□□□□ 0.17
CCHCR1-228ENST00000509552 PCNX3Q9H6A9 2034 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 MS4A18H0YCH9 400 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 SHOXO15266 292 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 ACHEP22303 614 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 APOBEC1P41238 236 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 TAS2R19P59542 299 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 SMAD4Q13485 552 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 MS4A18Q3C1V0 323 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 WDR74Q6RFH5 385 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 NHLRC1Q6VVB1 395 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 ZNF704Q6ZNC4 412 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 H1FNTQ75WM6 255 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 DCXRQ7Z4W1 244 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 BPHLQ86WA6 291 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 CLEC1AQ8NC01 280 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 SLC26A10Q8NG04 563 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 MFSD8Q8NHS3 518 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 SUN5Q8TC36 379 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 STT3BQ8TCJ2 826 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 ASB10Q8WXI3 467 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 EXO5Q9H790 373 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 UPB1Q9UBR1 384 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 SUSD2Q9UGT4 822 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 OR52A1Q9UKL2 312 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 CPAMD8Q8IZJ3 1885 aa16.08■□□□□ 0.16
CCHCR1-228ENST00000509552 PDGFAP04085 211 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 LPLP06858 475 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 CXCL2P19875 107 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 CSRP2Q16527 193 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 GABRG1Q8N1C3 465 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 PNPLA2Q96AD5 504 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 SFXN2Q96NB2 322 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 TGIF2Q9GZN2 237 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 APMAPQ9HDC9 416 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 TMEM138Q9NPI0 162 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 DCDC2BA2VCK2 349 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 C2orf72A6NCS6 295 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 TUBAL3A6NHL2 446 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 I3L521 148 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 SRSF10O75494 262 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 ISG15P05161 165 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 FCER2P06734 321 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 MYF5P13349 255 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 PTGS2P35354 604 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 ARRB1P49407 418 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 SUMO3P55854 103 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 FBXW4P57775 412 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 TMEM244Q5VVB8 128 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 C3P1Q6ZMU1 363 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 C16orf47Q6ZP98 133 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 ADGRE4PQ86SQ3 457 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 JAGN1Q8N5M9 183 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 OR2AK2Q8NG84 335 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 TNFAIP8L1Q8WVP5 186 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 DVL3Q92997 716 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 DDIT4LQ96D03 193 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 NKX3-1Q99801 234 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 POTEKPQ9BYX7 375 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 SCPEP1Q9HB40 452 aa16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 CGGBP1Q9UFW8 167 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-228ENST00000509552 USP34Q70CQ2 3546 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 TMEM269A0A1B0GVZ9 245 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 LOC107986453A0A1B0GWG9 222 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 MCRIP1C9JLW8 97 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 MEN1O00255 615 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 ADAM10O14672 748 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 AQP8O94778 261 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 GABRA1P14867 456 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 TLE3Q04726 772 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 FMODQ06828 376 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms