RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 KLF3P57682 345 aaPredicted RBP13.83□□□□□ -0.2
LMNA-222ENST00000508500 ACTR3P61158 418 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 TRIM25Q14258 630 aaKnown RBP13.83□□□□□ -0.2
LMNA-222ENST00000508500 TAF11Q15544 211 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 NKPD1Q17RQ9 610 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 IFI44LQ53G44 452 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 THEM4Q5T1C6 240 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 OR1J2Q8NGS2 313 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 OR1J1Q8NGS3 322 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 ACOT11Q8WXI4 607 aaPredicted RBP13.83□□□□□ -0.2
LMNA-222ENST00000508500 LZICQ8WZA0 190 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 FNDC11Q9BVV2 318 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 BCL2L14Q9BZR8 327 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 CCNB1IP1Q9NPC3 277 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 TMEFF2Q9UIK5 374 aaPredicted RBP13.83□□□□□ -0.2
LMNA-222ENST00000508500 POMPQ9Y244 141 aa13.83□□□□□ -0.2
LMNA-222ENST00000508500 EFCAB9A8MZ26 197 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 H7C1C5 153 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 IGHV3-13P01766 116 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 CCNOP22674 350 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 MPV17P39210 176 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 GPR4P46093 362 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 LMO4P61968 165 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 LCN6P62502 163 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 CCL8P80075 99 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 MRPS11P82912 194 aaKnown RBP13.82□□□□□ -0.2
LMNA-222ENST00000508500 HSF2Q03933 536 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 GLO1Q04760 184 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 ENDOGQ14249 297 aaKnown RBP13.82□□□□□ -0.2
LMNA-222ENST00000508500 C1orf146Q5VVC0 180 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 UGT2A3Q6UWM9 527 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 TMPRSS11FQ6ZWK6 438 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 MBOAT2Q6ZWT7 520 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 OAFQ86UD1 273 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 RNF113BQ8IZP6 322 aaKnown RBP13.82□□□□□ -0.2
LMNA-222ENST00000508500 ICA1LQ8NDH6 482 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 GEMIN6Q8WXD5 167 aaKnown RBP13.82□□□□□ -0.2
LMNA-222ENST00000508500 C11orf40Q8WZ69 217 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 MARS2Q96GW9 593 aaKnown RBP13.82□□□□□ -0.2
LMNA-222ENST00000508500 ZNF416Q9BWM5 594 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 OR2H1Q9GZK4 316 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 HINT3Q9NQE9 182 aaKnown RBP13.82□□□□□ -0.2
LMNA-222ENST00000508500 ADAM18Q9Y3Q7 739 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 CACNG2Q9Y698 323 aa13.82□□□□□ -0.2
LMNA-222ENST00000508500 C5orf49A4QMS7 147 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 CDC14BO60729 498 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 FKBP6O75344 327 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 NGFP01138 241 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 CST2P09228 141 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 MMP15P51511 669 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 DVL1P1P54792 670 aaPredicted RBP13.81□□□□□ -0.2
LMNA-222ENST00000508500 TMEM33P57088 247 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 MESTQ5EB52 335 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 SPATA46Q5T0L3 261 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 RFPL4BQ6ZWI9 263 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 FAM122BQ7Z309 247 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 SLC25A40Q8TBP6 338 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 SLC7A13Q8TCU3 470 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 CLPTM1LQ96KA5 538 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 Q96M85 177 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 RBP7Q96R05 134 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 NMNAT1Q9HAN9 279 aaPredicted RBP13.81□□□□□ -0.2
LMNA-222ENST00000508500 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 NKIRAS2Q9NYR9 191 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 TREM2Q9NZC2 230 aa13.81□□□□□ -0.2
LMNA-222ENST00000508500 DOCK11Q5JSL3 2073 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 A0A1W2PPL8 197 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 IMPA2O14732 288 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 GSTA4O15217 222 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 PPIHO43447 177 aaKnown RBP13.8□□□□□ -0.2
LMNA-222ENST00000508500 ICMTO60725 284 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 PTP4A3O75365 173 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 HNF1AP20823 631 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 IFNA8P32881 189 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 CRYBB2P43320 205 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 SLC9A3P48764 834 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 HNRNPA0Q13151 305 aaKnown RBP13.8□□□□□ -0.2
LMNA-222ENST00000508500 ANKDD1AQ495B1 522 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 SPRNQ5BIV9 151 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 MTX3Q5HYI7 312 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 OTPQ5XKR4 325 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 ZNF774Q6NX45 483 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 ZNF730Q6ZMV8 503 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 FKBP9P1Q75LS8 142 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 FAM86B1Q8N7N1 296 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 FAM156AQ8NDB6 213 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 IPCEF1Q8WWN9 437 aaPredicted RBP13.8□□□□□ -0.2
LMNA-222ENST00000508500 TRIM15Q9C019 465 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 OR2J1Q9GZK6 312 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 DCLRE1BQ9H816 532 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 EMC7Q9NPA0 242 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 EGFL7Q9UHF1 273 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 ENPP4Q9Y6X5 453 aa13.8□□□□□ -0.2
LMNA-222ENST00000508500 B4DSR2 109 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 ACOT8O14734 319 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 GAAP10253 952 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 NR2C1P13056 603 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 HOXB6P17509 224 aaKnown RBP13.79□□□□□ -0.2
LMNA-222ENST00000508500 RBMXP38159 391 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms