RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SEC22CQ9BRL7 303 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 SMOC1Q9H4F8 434 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 SCP2D1Q9UJQ7 156 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 LRP12Q9Y561 859 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 GPR179Q6PRD1 2367 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 A0A1B0GVI7 797 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 LCN1P31025 176 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 RAD52P43351 418 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 TLE3Q04726 772 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 IKZF1Q13422 519 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 ZNF385CQ66K41 422 aaPredicted RBP12.98□□□□□ -0.33
DDX41-208ENST00000507955 LRFN4Q6PJG9 635 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 NUP54Q7Z3B4 507 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 PPP1R3BQ86XI6 285 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 ZNF679Q8IYX0 411 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 S100A16Q96FQ6 103 aaKnown RBP12.98□□□□□ -0.33
DDX41-208ENST00000507955 C5orf34Q96MH7 638 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 CHIAQ9BZP6 476 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 SLITRK2Q9H156 845 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 PLEKHA1Q9HB21 404 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 CA10Q9NS85 328 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 PTTG3PQ9NZH4 202 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 VSX1Q9NZR4 365 aaPredicted RBP12.98□□□□□ -0.33
DDX41-208ENST00000507955 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 EMC9Q9Y3B6 208 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 TMEM14AQ9Y6G1 99 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 ANKUB1A6NFN9 424 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 TMEM212A6NML5 194 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 KDM4BO94953 1096 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 LPAL2Q16609 132 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 SLC18B1Q6NT16 456 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 DCXRQ7Z4W1 244 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 PHYHIPQ92561 330 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 DIABLOQ9NR28 239 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 MYOTQ9UBF9 498 aa12.98□□□□□ -0.33
DDX41-208ENST00000507955 TRBV5-7A0A0A0MS05 114 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 LOC105371267A0A1B0GV96 52 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 ZNF814B7Z6K7 855 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 ARPC1BO15143 372 aaKnown RBP12.97□□□□□ -0.33
DDX41-208ENST00000507955 HRGP04196 525 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 CCL4P13236 92 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 PSMB1P20618 241 aaKnown RBP12.97□□□□□ -0.33
DDX41-208ENST00000507955 ART1P52961 327 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 BLVRAP53004 296 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 GUCA2AQ02747 115 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 PMS2CLQ68D20 193 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 BAIAP2L2Q6UXY1 529 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 GPAT4Q86UL3 456 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 OR51A2Q8NGJ7 313 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 TMEM234Q8WY98 164 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 CCDC120Q96HB5 630 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 DHRS9Q9BPW9 319 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 DUSP23Q9BVJ7 150 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 METTL7AQ9H8H3 244 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 CENPMQ9NSP4 180 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 PPP4R1LQ9P1A2 415 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 NPIPA5E9PKD4 350 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 OR2T1O43869 369 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 RAMP1O60894 148 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 KHDRBS3O75525 346 aaKnown RBP12.97□□□□□ -0.33
DDX41-208ENST00000507955 PDGFAP04085 211 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 PTGDSP41222 190 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 GLO1Q04760 184 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 IFI44Q8TCB0 444 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 MCHR2Q969V1 340 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
DDX41-208ENST00000507955 PIPOXQ9P0Z9 390 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 CGGBP1Q9UFW8 167 aaPredicted RBP12.97□□□□□ -0.33
DDX41-208ENST00000507955 NPIPA1Q9UND3 350 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 FRYQ5TBA9 3013 aa12.97□□□□□ -0.33
DDX41-208ENST00000507955 G3V3Y1 287 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 GABARAPH6UMI1 98 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.33
DDX41-208ENST00000507955 SFTPDP35247 375 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 BIDP55957 195 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 TAS2R20P59543 309 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 H1FNTQ75WM6 255 aaPredicted RBP12.96□□□□□ -0.33
DDX41-208ENST00000507955 POC1BQ8TC44 478 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 STK35Q8TDR2 534 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 RNF128Q8TEB7 428 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 ASB10Q8WXI3 467 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 HAVCR1Q96D42 359 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 ACTR6Q9GZN1 396 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 RPH3AQ9Y2J0 694 aaPredicted RBP12.96□□□□□ -0.33
DDX41-208ENST00000507955 PCDHGA5Q9Y5G8 931 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 DCDC2BA2VCK2 349 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 I3L521 148 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 TOX3O15405 576 aaPredicted RBP12.96□□□□□ -0.33
DDX41-208ENST00000507955 ANXA7P20073 488 aaKnown RBP12.96□□□□□ -0.33
DDX41-208ENST00000507955 CSRP1P21291 193 aaKnown RBP12.96□□□□□ -0.33
DDX41-208ENST00000507955 HSF1Q00613 529 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 RASGEF1BQ0VAM2 473 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 MYBPHQ13203 477 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 MFAP5Q13361 173 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 LINC00303Q3SY05 128 aa12.96□□□□□ -0.33
DDX41-208ENST00000507955 CARD17Q5XLA6 110 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms