RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 TNK1Q13470 666 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 DNASE1L3Q13609 305 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 AMZ1Q400G9 498 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 C1orf185Q5T7R7 199 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 Q6ZPA2 131 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 SHISA6Q6ZSJ9 500 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 Q6ZSR3 168 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 LINGO2Q7L985 606 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 CXXC5Q7LFL8 322 aaKnown RBP5.22□□□□□ -1.57
SCLT1-207ENST00000506233 NOXA1Q86UR1 476 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 DRAXINQ8NBI3 349 aaPredicted RBP5.22□□□□□ -1.57
SCLT1-207ENST00000506233 CLEC1AQ8NC01 280 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 ARL5BQ96KC2 179 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 RBM14Q96PK6 669 aaKnown RBP5.22□□□□□ -1.57
SCLT1-207ENST00000506233 WDR76Q9H967 626 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 TRPC4Q9UBN4 977 aa5.22□□□□□ -1.57
SCLT1-207ENST00000506233 TRBV5-5A0A0J9YX44 114 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 EFCAB10A6NFE3 127 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 KIAA1324LA8MWY0 1029 aaPredicted RBP5.21□□□□□ -1.57
SCLT1-207ENST00000506233 AIREO43918 545 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 OR7A10O76100 309 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 PPP1R3DO95685 299 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 VSIG8P0DPA2 414 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 GALP22466 123 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 SDC2P34741 201 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 C21orf59P57076 290 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 MFAP5Q13361 173 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 MDGA2Q7Z553 956 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF578Q96N58 590 aaPredicted RBP5.21□□□□□ -1.57
SCLT1-207ENST00000506233 ROGDIQ9GZN7 287 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 PLGRKTQ9HBL7 147 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 RAB9BQ9NP90 201 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF319Q9P2F9 582 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 FBXL2Q9UKC9 423 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 STUB1Q9UNE7 303 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 TPRKBQ9Y3C4 175 aa5.21□□□□□ -1.57
SCLT1-207ENST00000506233 ANK3Q12955 4377 aaKnown RBP5.21□□□□□ -1.58
SCLT1-207ENST00000506233 TRBV5-7A0A0A0MS05 114 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 CIB4A0PJX0 185 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 EFCAB7A8K855 629 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 RNF13O43567 381 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 LMX1BO60663 402 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 ALOX5P09917 674 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 TMEM225BP0DP42 221 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 IGFBP3P17936 291 aaPredicted RBP5.21□□□□□ -1.58
SCLT1-207ENST00000506233 SPI1P17947 270 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF133P52736 654 aaPredicted RBP5.21□□□□□ -1.58
SCLT1-207ENST00000506233 RAC3P60763 192 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 BDH1Q02338 343 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 AGAP7PQ5VUJ5 663 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 SLC36A4Q6YBV0 504 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 TTLL10Q6ZVT0 673 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 CYB561A3Q8NBI2 242 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 OR5H6Q8NGV6 325 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 OIT3Q8WWZ8 545 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 FCGR1BQ92637 280 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 EDAQ92838 391 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 NMNAT3Q96T66 252 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 FNDC11Q9BVV2 318 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 KIAA1456Q9P272 454 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 GABRPO00591 440 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 SPRY2O43597 315 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 MPZL1O95297 269 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 RNH1P13489 461 aaKnown RBP5.21□□□□□ -1.58
SCLT1-207ENST00000506233 NT5EP21589 574 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 DPP4P27487 766 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 SMSP52788 366 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 FBXW4P57775 412 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 QRFPP83859 136 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 IL24Q13007 206 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 C22orf42Q6IC83 251 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 HSDL2Q6YN16 418 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 ADGRE4PQ86SQ3 457 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 GPAT4Q86UL3 456 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 GKN2Q86XP6 184 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 GCDHQ92947 438 aaPredicted RBP5.21□□□□□ -1.58
SCLT1-207ENST00000506233 MCHR2Q969V1 340 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.58
SCLT1-207ENST00000506233 CCDC3Q9BQI4 270 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 ING2Q9H160 280 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 C3orf14Q9HBI5 128 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 CCNB1IP1Q9NPC3 277 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 PRTFDC1Q9NRG1 225 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 N6AMT1Q9Y5N5 214 aa5.21□□□□□ -1.58
SCLT1-207ENST00000506233 A0A1B0GX78 115 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 SAGE2PA6NJ88 616 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 DUXAA6NLW8 204 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 C9orf172C9J069 976 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 KPNA4O00629 521 aaPredicted RBP5.2□□□□□ -1.58
SCLT1-207ENST00000506233 ZIC3O60481 467 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 PRAMEF2O60811 474 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 EIF4EP06730 217 aaKnown RBP5.2□□□□□ -1.58
SCLT1-207ENST00000506233 ACP1P24666 158 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 PCP4P48539 62 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 ELAVL1Q15717 326 aaKnown RBP5.2□□□□□ -1.58
SCLT1-207ENST00000506233 NDUFA9Q16795 377 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF404Q494X3 552 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 C1orf189Q5VU69 101 aa5.2□□□□□ -1.58
SCLT1-207ENST00000506233 SHEQ5VZ18 495 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms