RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 DUX4L3P0CJ86 424 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 DUX4L5P0CJ88 424 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 DUX4L6P0CJ89 424 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 DUX4L7P0CJ90 424 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 DCKP27707 260 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 PRMT2P55345 433 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 FLI1Q01543 452 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 EXOC3L2Q2M3D2 409 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 AP1ARQ63HQ0 302 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 SPINT4Q6UDR6 99 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMEM104Q8NE00 496 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 C1orf64Q8NEQ6 169 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR1L6Q8NGR2 347 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR9A2Q8NGT5 310 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 MRGPRFQ96AM1 343 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 TCEANC2Q96MN5 208 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 SHANK2-AS3Q9BTD1 123 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMEM43Q9BTV4 400 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 CWH43Q9H720 699 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 DUX4Q9UBX2 424 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 SIGLEC7Q9Y286 467 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMED5Q9Y3A6 229 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 CNTNAP1P78357 1384 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 ADGRL1O94910 1474 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 AHDC1Q5TGY3 1603 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF816-ZNF321PA0A0X1KG74 233 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 GOLGA8SH3BPF8 625 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 DBTP11182 482 aaKnown RBP1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 CCNG1P51959 295 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 MXD1Q05195 221 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 CDH17Q12864 832 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 RCAN2Q14206 197 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 CCDC152Q4G0S7 254 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 CCNJQ5T5M9 372 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 LRRC74BQ6ZQY2 392 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 METTL13Q8N6R0 699 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 PTX4Q96A99 478 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 TBL1YQ9BQ87 522 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 ERP44Q9BS26 406 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 FGF23Q9GZV9 251 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 FAM49BQ9NUQ9 324 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 PEX16Q9Y5Y5 336 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 AP1M2Q9Y6Q5 423 aa1.31□□□□□ -2.2
HMGB1P29-201ENST00000505659 BTBD17A6NE02 478 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 FAM47DPA6NHR8 397 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 SNTNA6NMZ2 147 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 BTNL10A8MVZ5 291 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 L7N2F9 121 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 HAS3O00219 553 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF208O43345 1280 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 PSTPIP1O43586 416 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 SOX15O60248 233 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 H6PDO95479 791 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 IGLV3-25P01717 112 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR5H8P0DN80 308 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 ATP1B2P14415 290 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 ETS2P15036 469 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 RAB3BP20337 219 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 LOXP28300 417 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 CASP14P31944 242 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 CEACAM3P40198 252 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 GPX6P59796 221 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 RPS11P62280 158 aaKnown RBP eCLIP1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 ECH1Q13011 328 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 RNASE13Q5GAN3 156 aaKnown RBP1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 GUSBP11Q6P575 273 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR4F6Q8NGB9 312 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 NTAN1Q96AB6 310 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 SERPINB12Q96P63 405 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 C1orf198Q9H425 327 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 C8orf17Q9NRJ1 99 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 CBY1Q9Y3M2 126 aa1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P29-201ENST00000505659 CENPVL3A0A0U1RRI6 287 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMEM120BA0PK00 339 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 GPR89AB7ZAQ6 455 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 REM1O75628 298 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 TSPAN12O95859 305 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 CD3GP09693 182 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 GPR89BP0CG08 455 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 IL1RNP18510 177 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 ME2P23368 584 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 RND2P52198 227 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 TAS2R31P59538 309 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 SEC61GP60059 68 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 CDK5Q00535 292 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 GK3PQ14409 553 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 MPV17L2Q567V2 206 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 THEM4Q5T1C6 240 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMEM136Q6ZRR5 245 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 SNX20Q7Z614 316 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMEM256Q8N2U0 113 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF664Q8N3J9 261 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 SPANXA2-OT1Q8N9U9 137 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 SAMSN1Q9NSI8 373 aaKnown RBP1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 ENOPH1Q9UHY7 261 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 ING4Q9UNL4 249 aa1.29□□□□□ -2.2
HMGB1P29-201ENST00000505659 IGLV1-36A0A0B4J1U3 117 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 A0A1W2PPE3 182 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 TMEM50AO95807 157 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms