RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CAPGP40121 348 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 RPS27P42677 84 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CLRN1P58418 232 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 LSM6P62312 80 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 MAD2L1BPQ15013 274 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SNAPC1Q16533 368 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 MSMPQ1L6U9 139 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TMEM255AQ5JRV8 349 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 C1QTNF12Q5T7M4 302 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OR7E24Q6IFN5 339 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SLC18B1Q6NT16 456 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 IZUMO2Q6UXV1 221 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF813Q6ZN06 617 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 LIAT1Q6ZQX7 453 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CXXC5Q7LFL8 322 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 BHLHA15Q7RTS1 189 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 PRSS45Q7RTY3 260 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 P2RY8Q86VZ1 359 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 GLB1L2Q8IW92 636 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF511Q8NB15 262 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF485Q8NCK3 441 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OR6N1Q8NGY5 312 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 LINC01560Q8TB33 94 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SMAP2Q8WU79 429 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 IGFBPL1Q8WX77 278 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 NSMAFQ92636 917 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF582Q96NG8 517 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 IL4I1Q96RQ9 567 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SH3GL3Q99963 347 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SPOCK3Q9BQ16 436 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 HDHD5Q9BXW7 423 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ADGRL4Q9HBW9 690 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 EMC7Q9NPA0 242 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 FKBP14Q9NWM8 211 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CRIM1Q9NZV1 1036 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 KIF17Q9P2E2 1029 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ENOPH1Q9UHY7 261 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 POLQO75417 2590 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 AKAP9Q99996 3911 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 AKAP6Q13023 2319 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SPG11Q96JI7 2443 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 IGHV1-18A0A0C4DH31 117 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 OR6C6A6NF89 314 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 DPRXA6NFQ7 191 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 RIIAD1A6NNX1 92 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 PRR23D1E9PI22 279 aaPredicted RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 XKRYO14609 159 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 DENRO43583 198 aaKnown RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SYNGR3O43761 229 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SELENOFO60613 162 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 ENTPD6O75354 484 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 KHDRBS3O75525 346 aaKnown RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 HLA-HP01893 362 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CST2P09228 141 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SBK2P0C263 348 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 PRR23D2P0DMB1 279 aaPredicted RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF32P17041 273 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 ALOX5APP20292 161 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 MSR1P21757 451 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 MYF6P23409 242 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 COL8A1P27658 744 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CRABP1P29762 137 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 VHLP40337 213 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 TUBA1BP68363 451 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 TUBA4AP68366 448 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 PSG4Q00888 419 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 IL1RL1Q01638 556 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 TEKQ02763 1124 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 MVKQ03426 396 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 GLO1Q04760 184 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CDK5R2Q13319 367 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 IL18R1Q13478 541 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 DAZAP2Q15038 168 aaPredicted RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 C3orf36Q3SXR2 165 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CCDC92Q53HC0 331 aaPredicted RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SLC35D3Q5M8T2 416 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 C6orf52Q5T4I8 152 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CFAP77Q6ZQR2 320 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 COLCA1Q6ZS62 124 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 TUBA1AQ71U36 451 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SSX6Q7RTT6 188 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 SYT9Q86SS6 491 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CDC20BQ86Y33 519 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 UBE2J2Q8N2K1 259 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 PAQR4Q8N4S7 273 aaPredicted RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 DHRSXQ8N5I4 330 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 STEAP2Q8NFT2 490 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 OR2T4Q8NH00 348 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CNIH3Q8TBE1 160 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 POM121L2Q96KW2 1035 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 DACH2Q96NX9 599 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 RBP7Q96R05 134 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 WNT5BQ9H1J7 359 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 OBP2BQ9NPH6 170 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 PLCXD1Q9NUJ7 323 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 DDX28Q9NUL7 540 aaKnown RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 PAK1IP1Q9NWT1 392 aaPredicted RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 UPB1Q9UBR1 384 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms