RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SELENOVP59797 346 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 PCBD1P61457 104 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
HOXC9-202ENST00000504557 ENDOGQ14249 297 aaKnown RBP12.23□□□□□ -0.45
HOXC9-202ENST00000504557 GPR139Q6DWJ6 353 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 JAZF1Q86VZ6 243 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 ALDH16A1Q8IZ83 802 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 ZNF101Q8IZC7 436 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 OR9Q2Q8NGE9 314 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 ABHD4Q8TB40 342 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 UBASH3BQ8TF42 649 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
HOXC9-202ENST00000504557 SAMD8Q96LT4 415 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 TSSK2Q96PF2 358 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 FUZQ9BT04 418 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 OR52D1Q9H346 318 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 FN3KQ9H479 309 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 NRIP3Q9NQ35 241 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 ACTR3BQ9P1U1 418 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 EIF3KQ9UBQ5 218 aaKnown RBP12.23□□□□□ -0.45
HOXC9-202ENST00000504557 FBXO9Q9UK97 447 aaPredicted RBP12.23□□□□□ -0.45
HOXC9-202ENST00000504557 TIMM10BQ9Y5J6 103 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 IGHV4-61A0A0C4DH41 118 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 LRP5LA4QPB2 252 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 TNFRSF11BO00300 401 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 TPD52L2O43399 206 aaKnown RBP12.22□□□□□ -0.45
HOXC9-202ENST00000504557 DOK2O60496 412 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 KHDRBS3O75525 346 aaKnown RBP12.22□□□□□ -0.45
HOXC9-202ENST00000504557 STAMBPO95630 424 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 SNAP29O95721 258 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 HPXP02790 462 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 APEHP13798 732 aaKnown RBP12.22□□□□□ -0.45
HOXC9-202ENST00000504557 NOS3P29474 1203 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 SLC6A6P31641 620 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 IFNGR2P38484 337 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 WNT5AP41221 380 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 CDKN2AP42771 156 aaKnown RBP12.22□□□□□ -0.45
HOXC9-202ENST00000504557 MS4A2Q01362 244 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 SPATS1Q496A3 300 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 CLEC12AQ5QGZ9 265 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 SLC35F1Q5T1Q4 408 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 C1orf94Q6P1W5 598 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 LEG1Q6P5S2 330 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 DPY19L2P2Q6ZN68 376 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 OR4K13Q8NH42 304 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 BCAS4Q8TDM0 211 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 GNPDA2Q8TDQ7 276 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 SNX33Q8WV41 574 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 POM121L2Q96KW2 1035 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 LRGUKQ96M69 825 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 THTPAQ9BU02 230 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 BCL2L14Q9BZR8 327 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 NUAK2Q9H093 628 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 MS4A5Q9H3V2 200 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 NARFLQ9H6Q4 476 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 EGLN3Q9H6Z9 239 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 SRA1Q9HD15 236 aaKnown RBP12.22□□□□□ -0.45
HOXC9-202ENST00000504557 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
HOXC9-202ENST00000504557 U3KQV3 271 aa12.22□□□□□ -0.45
HOXC9-202ENST00000504557 TCRBV5S2A0A599 114 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 A8MV72 311 aaPredicted RBP12.21□□□□□ -0.45
HOXC9-202ENST00000504557 VWC2LB2RUY7 222 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 NDUFS8O00217 210 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 FPR3P25089 353 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 GCH1P30793 250 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 MPV17P39210 176 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 MAGEB1P43366 347 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 HTR5AP47898 357 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 EVX1P49640 407 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 CCL8P80075 99 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 TRIM25Q14258 630 aaKnown RBP12.21□□□□□ -0.45
HOXC9-202ENST00000504557 MEP1BQ16820 701 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 RFX4Q33E94 735 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 PGBD2Q6P3X8 592 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 TMEM154Q6P9G4 183 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 FOXL2NBQ6ZUU3 175 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 ADCK1Q86TW2 530 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 SDR9C7Q8NEX9 313 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 SLC25A40Q8TBP6 338 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 SLC7A6Q92536 515 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 SNX18Q96RF0 628 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 GPX7Q96SL4 187 aaPredicted RBP12.21□□□□□ -0.45
HOXC9-202ENST00000504557 NMNAT3Q96T66 252 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 CHODLQ9H9P2 273 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 PLEK2Q9NYT0 353 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 LYVE1Q9Y5Y7 322 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 JMJD1CQ15652 2540 aa12.21□□□□□ -0.45
HOXC9-202ENST00000504557 DCTN6O00399 190 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 SGCEO43556 437 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 TLX2O43763 284 aaPredicted RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 CDC14BO60729 498 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 NCR1O76036 304 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 CCNB2O95067 398 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 ABHD16AO95870 558 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 RENP00797 406 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 NGFP01138 241 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 HIST1H1CP16403 213 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms