RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 ST7LQ8TDW4 575 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 TSPEARQ8WU66 669 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 DIRC2Q96SL1 478 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 ALG12Q9BV10 488 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 C1QTNF5Q9BXJ0 243 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 TXNIPQ9H3M7 391 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF696Q9H7X3 374 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 ZDHHC8Q9ULC8 765 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 HIF3AQ9Y2N7 669 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 SH3GLB1Q9Y371 365 aa11.93□□□□□ -0.5
POLR2J3-207ENST00000503564 TRRAPQ9Y4A5 3859 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 GMNCA6NCL1 334 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 A8MXK9 166 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 TRAPPC2LH3BP13 241 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 SHOX2O60902 331 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 CST2P09228 141 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 NR2C1P13056 603 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF12P17014 697 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 PRTN3P24158 256 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 SEC61A1P61619 476 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 TNFAIP6P98066 277 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 FOXL1Q12952 345 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF154Q13106 437 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 CDK5R2Q13319 367 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 TOP3AQ13472 1001 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 PIN1Q13526 163 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ENDOGQ14249 297 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 TAF11Q15544 211 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZMAT1Q5H9K5 638 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 MTX3Q5HYI7 312 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF774Q6NX45 483 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 SHISA2Q6UWI4 295 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 CALHM3Q86XJ0 350 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF283Q8N7M2 679 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 LRRC75AQ8NAA5 344 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 POFUT1Q9H488 388 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 TMEM106BQ9NUM4 274 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 RIMS3Q9UJD0 308 aa11.92□□□□□ -0.5
POLR2J3-207ENST00000503564 PKD1L1Q8TDX9 2849 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 F5H0A9 414 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 FXYD1O00168 92 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 FBP2O00757 339 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 THRBP10828 461 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 RPL27P61353 136 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 PSG7Q13046 419 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 ALG10Q5BKT4 473 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 ARMCX4Q5H9R4 360 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 NANOGP8Q6NSW7 305 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 Q6ZR03 302 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 TREML1Q86YW5 311 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 BCL6BQ8N143 479 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 SPICQ8N5J4 248 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 THOC1Q96FV9 657 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 C4orf45Q96LM5 186 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 ELOVL3Q9HB03 270 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 PATZ1Q9HBE1 687 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 NUP50Q9UKX7 468 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 BAG5Q9UL15 447 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 MED31Q9Y3C7 131 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 TIMM10BQ9Y5J6 103 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 INSIG2Q9Y5U4 225 aa11.91□□□□□ -0.5
POLR2J3-207ENST00000503564 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 TIMM8AO60220 97 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 SBK2P0C263 348 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 FUT4P22083 530 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 OR1E2P47887 323 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 SLC6A9P48067 706 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 ARHGDIAP52565 204 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 BTG1P62324 171 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 FHL1Q13642 323 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 ZMYND11Q15326 602 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 TTMPQ5BVD1 217 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 ALDH16A1Q8IZ83 802 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 FNDC8Q8TC99 324 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
POLR2J3-207ENST00000503564 SCG5P05408 212 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 RNASE1P07998 156 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 KITLGP21583 273 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 MSR1P21757 451 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 PCBD1P61457 104 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 FAM205BPQ63HN1 556 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 ZER1Q7Z7L7 766 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 SYT9Q86SS6 491 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 IGFN1Q86VF2 1251 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 LRRC28Q86X40 367 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 KLHL36Q8N4N3 616 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 NPEPL1Q8NDH3 523 aa11.89□□□□□ -0.51
POLR2J3-207ENST00000503564 OR8J3Q8NGG0 315 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms