RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GATBO75879 557 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 RGS9O75916 674 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ABHD16AO95870 558 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 CST2P09228 141 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 H2BFMP0C1H6 154 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 OR8G3PP0DMU2 310 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 EDNRAP25101 427 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 MAPK3P27361 379 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 CRYBB2P43320 205 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 CCR9P51686 369 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 HCCSP53701 268 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 GRB2P62993 217 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ROR2Q01974 943 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 RBPJQ06330 500 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 SCRN3Q0VDG4 424 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 NFATC3Q12968 1075 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 SGCAQ16586 387 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 MEP1BQ16820 701 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 DGUOKQ16854 277 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ACSF3Q4G176 576 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 TP53I3Q53FA7 332 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 LIPNQ5VXI9 398 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF324BQ6AW86 544 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ARL9Q6T311 187 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 KLHL24Q6TFL4 600 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF627Q7L945 461 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 FGD2Q7Z6J4 655 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 WDFY1Q8IWB7 410 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 KDF1Q8NAX2 398 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 RPS4Y2Q8TD47 263 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 RNF133Q8WVZ7 376 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 KCTD7Q96MP8 289 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 TRIB1Q96RU8 372 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 FOXB1Q99853 325 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 CHCHD6Q9BRQ6 235 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 NAA50Q9GZZ1 169 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 MOB1AQ9H8S9 216 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ELOVL3Q9HB03 270 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 CRLF2Q9HC73 371 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 GPR35Q9HC97 309 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 EXOSC4Q9NPD3 245 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ACOXLQ9NUZ1 547 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 MRM2Q9UI43 246 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ST6GALNAC2Q9UJ37 374 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 SF3B6Q9Y3B4 125 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 UGT2A1Q9Y4X1 527 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 KIAA1549Q9HCM3 1950 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 TNRC6AQ8NDV7 1962 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MBD3L4A6NDZ8 208 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MBD3L3A6NE82 208 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MBD3L5A6NJ08 208 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ACOD1A6NK06 481 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 K7EM74 188 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TAF4O00268 1085 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 PRRG2O14669 202 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 UPK3AO75631 287 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ATE1O95260 518 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MPZL1O95297 269 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 GPANK1O95872 356 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TGM6O95932 706 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 LALBAP00709 142 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 HSD11B1P28845 292 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MPGP29372 298 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 AGTR1P30556 359 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 CDAP32320 146 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TIMP3P35625 211 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 SOX6P35712 828 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 CD79BP40259 229 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 OPRL1P41146 370 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 OR3A2P47893 321 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 GDI2P50395 445 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MMP16P51512 607 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 VBP1P61758 197 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TGFBR3Q03167 851 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 KLRB1Q12918 225 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ECH1Q13011 328 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TAF13Q15543 124 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 C3AR1Q16581 482 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 CEACAM16Q2WEN9 425 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 LINC00303Q3SY05 128 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 YIF1BQ5BJH7 314 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TSPO2Q5TGU0 170 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 FBXW9Q5XUX1 488 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 LINC00299Q6ZSB3 139 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 FAM214BQ7L5A3 538 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 CCDC36Q8IYA8 594 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 OR6K3Q8NGY3 331 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 OR5AK2Q8NH90 309 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MBD3L2Q8NHZ7 208 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 FAM57AQ8TBR7 257 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ST7LQ8TDW4 575 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 SMAP2Q8WU79 429 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 NABP1Q96AH0 204 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF775Q96BV0 537 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 SLAMF6Q96DU3 332 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 PGLYRP3Q96LB9 341 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 FOXN4Q96NZ1 517 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms