RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 DGUOKQ16854 277 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ZNF829Q3KNS6 432 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-216ENST00000502848 YIF1BQ5BJH7 314 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ZNF324BQ6AW86 544 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-216ENST00000502848 UNQ6494/PRO21346Q6UXR6 183 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 KRT77Q7Z794 578 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 OR2AJ1Q8NGZ0 328 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 FNDC9Q8TBE3 224 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 DYNC2LI1Q8TCX1 351 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ABHD3Q8WU67 409 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 C11orf40Q8WZ69 217 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ROBO4Q8WZ75 1007 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 NABP1Q96AH0 204 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ZNF845Q96IR2 970 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-216ENST00000502848 PGLYRP3Q96LB9 341 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 KCTD7Q96MP8 289 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 GPR137Q96N19 417 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 TAAR6Q96RI8 345 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 TSC22D3Q99576 134 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 TM9SF2Q99805 663 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ABHD6Q9BV23 337 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 RERGLQ9H628 205 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 DDX28Q9NUL7 540 aaKnown RBP8.02□□□□□ -1.13
NR1I3-216ENST00000502848 ACOXLQ9NUZ1 547 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 CAMK2AQ9UQM7 478 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 TP53TG5Q9Y2B4 290 aa8.02□□□□□ -1.13
NR1I3-216ENST00000502848 NCKAP5O14513 1909 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 KIAA1549Q9HCM3 1950 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TRBV2A0A0J9YWF9 115 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 A0A1W2PPL8 197 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 A0A1W2PPW3 197 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 FAM171A2A8MVW0 826 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 ZNF587BE7ETH6 402 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 GPX5O75715 221 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 FARS2O95363 451 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 RAF1P04049 648 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 AGTR1P30556 359 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 SOX6P35712 828 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 CD79BP40259 229 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 MTNR1BP49286 362 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 GDI2P50395 445 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 PMP22Q01453 160 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 SRYQ05066 204 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 DYNC1I2Q13409 638 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 LSAMPQ13449 338 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 ALKBH1Q13686 389 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 DOC2BQ14184 412 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 SPCS2Q15005 226 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 MEP1BQ16820 701 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TP53I3Q53FA7 332 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 LIPNQ5VXI9 398 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 NSUN5P2Q63ZY6 315 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 DCXRQ7Z4W1 244 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TPRA1Q86W33 373 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 CROCCP3Q8IVE0 287 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 WDFY1Q8IWB7 410 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 CCDC36Q8IYA8 594 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 RFLNBQ8N5W9 214 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 YIPF7Q8N8F6 280 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 CCDC54Q8NEL0 328 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 GJC3Q8NFK1 279 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 THEM6Q8WUY1 208 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 NSMAFQ92636 917 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 RPL3LQ92901 407 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 APH1AQ96BI3 265 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 CHCHD6Q9BRQ6 235 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 COMMD4Q9H0A8 199 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 HDHD2Q9H0R4 259 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 OR51E2Q9H255 320 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TXNL4BQ9NX01 149 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 IKZF2Q9UKS7 526 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 POLR1DQ9Y2S0 133 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 KLHDC2Q9Y2U9 406 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 EMC9Q9Y3B6 208 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 LHFPL6Q9Y693 200 aa8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TNRC6AQ8NDV7 1962 aaKnown RBP8.01□□□□□ -1.13
NR1I3-216ENST00000502848 TRAV1-2A0A0B4J238 106 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 MBD3L4A6NDZ8 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 MBD3L3A6NE82 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 MBD3L5A6NJ08 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 ZNF879B4DU55 563 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 GABRPO00591 440 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 SRSF10O75494 262 aaKnown RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 CLPXO76031 633 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 ISG15P05161 165 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 UBCP0CG48 685 aaKnown RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 PAX7P23759 505 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 EDNRAP25101 427 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 OTX1P32242 354 aaPredicted RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 OR3A2P47893 321 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 VBP1P61758 197 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 NCS1P62166 190 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 SCRN3Q0VDG4 424 aa8□□□□□ -1.13
NR1I3-216ENST00000502848 ENDOGQ14249 297 aaKnown RBP8□□□□□ -1.13
NR1I3-216ENST00000502848 PLEKHN1Q494U1 663 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms