RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 GIPC3Q8TF64 312 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 SLC25A43Q8WUT9 341 aaPredicted RBP4.43□□□□□ -1.7
FXN-205ENST00000498653 TMEM255BQ8WV15 326 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 TMEM239Q8WW34 195 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 ACOT11Q8WXI4 607 aaPredicted RBP4.43□□□□□ -1.7
FXN-205ENST00000498653 LINC00476Q8WZB0 136 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 ZNF524Q96C55 264 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 DDIT4LQ96D03 193 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 NRBF2Q96F24 287 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 EPYCQ99645 322 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 PRSS27Q9BQR3 290 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 TMEM43Q9BTV4 400 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 SEMA6AQ9H2E6 1030 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 RNPEPL1Q9HAU8 725 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 MYOZ1Q9NP98 299 aaPredicted RBP4.43□□□□□ -1.7
FXN-205ENST00000498653 KRCC1Q9NPI7 259 aaPredicted RBP4.43□□□□□ -1.7
FXN-205ENST00000498653 STX18Q9P2W9 335 aaKnown RBP4.43□□□□□ -1.7
FXN-205ENST00000498653 CHRNA9Q9UGM1 479 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 MED31Q9Y3C7 131 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 SAMHD1Q9Y3Z3 626 aaKnown RBP4.43□□□□□ -1.7
FXN-205ENST00000498653 LYVE1Q9Y5Y7 322 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 FKBP7Q9Y680 259 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 AP4B1Q9Y6B7 739 aa4.43□□□□□ -1.7
FXN-205ENST00000498653 TRAV36DV7A0A075B6V5 113 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 A0A087WUU8 490 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TRBV4-1A0A0J9YWV2 114 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SH3PXD2BA1X283 911 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 HTR3EA5X5Y0 456 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SAC3D1A6NKF1 404 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 E7EQL1 145 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 H3BML4 177 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 EFNA2O43921 213 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 OR10H3O60404 316 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 AHSA1O95433 338 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ATP6V1G2O95670 118 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ACTL6AO96019 429 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 HIST1H2ABP04908 130 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 CRHP06850 196 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 RBMY1CP0DJD4 496 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ANXA8P13928 327 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 IL11P20809 199 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SFTPDP35247 375 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
FXN-205ENST00000498653 HMGA2P52926 109 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 UGT2B15P54855 530 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 B3GALT5-AS1P59052 145 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SIRPAP78324 504 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SLC34A1Q06495 639 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 PPP1R8Q12972 351 aaKnown RBP4.42□□□□□ -1.7
FXN-205ENST00000498653 MICAQ29983 383 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TMEM176BQ3YBM2 270 aaPredicted RBP4.42□□□□□ -1.7
FXN-205ENST00000498653 C1orf140Q5VVS0 124 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 PGBD2Q6P3X8 592 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TBPL2Q6SJ96 375 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 B3GLCTQ6Y288 498 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 WDR88Q6ZMY6 472 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 MBOAT2Q6ZWT7 520 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 HIST3H2AQ7L7L0 130 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 STK32CQ86UX6 486 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 RNF113BQ8IZP6 322 aaKnown RBP4.42□□□□□ -1.7
FXN-205ENST00000498653 C10orf53Q8N6V4 93 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 OR10G2Q8NGC3 310 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 OR4K5Q8NGD3 323 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 OR4C15Q8NGM1 316 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 PIGXQ8TBF5 258 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SLC7A13Q8TCU3 470 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 GNPDA2Q8TDQ7 276 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 HIST1H2ACQ93077 130 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ABTB1Q969K4 478 aaPredicted RBP4.42□□□□□ -1.7
FXN-205ENST00000498653 SGTBQ96EQ0 304 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 KLHL15Q96M94 604 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 RCHY1Q96PM5 261 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 OR5B2Q96R09 309 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 NPAS1Q99742 590 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TACO1Q9BSH4 297 aaKnown RBP4.42□□□□□ -1.7
FXN-205ENST00000498653 FUZQ9BT04 418 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 C9orf16Q9BUW7 83 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TAPBPLQ9BX59 468 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 POTEKPQ9BYX7 375 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 SLC19A3Q9BZV2 496 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TMEM185BQ9H7F4 350 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ZNF556Q9HAH1 456 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 MAN2C1Q9NTJ4 1040 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 VNN3Q9NY84 501 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 FBLN5Q9UBX5 448 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ZNF69Q9UC07 566 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 OPN4Q9UHM6 478 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 FBXL7Q9UJT9 491 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 TMEM5Q9Y2B1 443 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 ZNF337Q9Y3M9 751 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 U3KQV3 271 aa4.42□□□□□ -1.7
FXN-205ENST00000498653 IGKV1D-42A0A075B6H8 117 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 ARRDC5A6NEK1 342 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 EFCAB9A8MZ26 197 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 E9PQ18 207 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 G3V2T6 193 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 KPNA4O00629 521 aaPredicted RBP4.41□□□□□ -1.7
FXN-205ENST00000498653 SEC14L5O43304 696 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 OR2T1O43869 369 aa4.41□□□□□ -1.7
FXN-205ENST00000498653 OR7A10O76100 309 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms