RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ARMC4Q5T2S8 1044 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 C9orf139Q6ZV77 190 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 LRRC28Q86X40 367 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-212ENST00000498540 C11orf65Q8NCR3 313 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 OR52E2Q8NGJ4 325 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 WFDC12Q8WWY7 111 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
TRAF4-212ENST00000498540 MPP4Q96JB8 637 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 OR2H1Q9GZK4 316 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 POFUT1Q9H488 388 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 INIPQ9NRY2 104 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-212ENST00000498540 OR5V1Q9UGF6 321 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 CD247P20963 164 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 MTNR1AP48039 350 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 PAX2Q02962 417 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 CD47Q08722 323 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 TAF11Q15544 211 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 OCLNQ16625 522 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 ZNF774Q6NX45 483 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 C16orf87Q6PH81 154 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 DLEU7Q6UYE1 221 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 Q6ZR03 302 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 HDDC2Q7Z4H3 204 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 PCDHAC1Q9H158 963 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 C20orf141Q9NUB4 165 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 MMP24Q9Y5R2 645 aa12.34□□□□□ -0.43
TRAF4-212ENST00000498540 TRAV40A0A0B4J280 105 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 CEACAM18A8MTB9 384 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 POLR3GO15318 223 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-212ENST00000498540 ERLIN1O75477 346 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 OR7A10O76100 309 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 PLATP00750 562 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 MT-ND1P03886 318 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 FUT1P19526 365 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 LAP3P28838 519 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 SELPLGQ14242 412 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 CYP51A1Q16850 503 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 RUNDC3AQ59EK9 446 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 FAM27BQ5VT28 67 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 SLC25A47Q6Q0C1 308 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 C1orf174Q8IYL3 243 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 CLDN22Q8N7P3 220 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 ITLN1Q8WWA0 313 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 TAMM41Q96BW9 452 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 C4orf45Q96LM5 186 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 SAMD8Q96LT4 415 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 EBF4Q9BQW3 602 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 ELOVL3Q9HB03 270 aa12.33□□□□□ -0.44
TRAF4-212ENST00000498540 HOXA3O43365 443 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-212ENST00000498540 TGDSO95455 350 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 KNG1P01042 644 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 CST2P09228 141 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 TSPAN19P0C672 248 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 TNFRSF1AP19438 455 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 TNFSF4P23510 183 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 MDH2P40926 338 aaKnown RBP12.32□□□□□ -0.44
TRAF4-212ENST00000498540 ARHGDIAP52565 204 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 MTPNP58546 118 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 TOP3AQ13472 1001 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-212ENST00000498540 AGKQ53H12 422 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 ZER1Q7Z7L7 766 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 NKAIN4Q8IVV8 208 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 KIR3DL3Q8N743 410 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 UPRTQ96BW1 309 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 SSBP3Q9BWW4 388 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-212ENST00000498540 NANOGQ9H9S0 305 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 STX18Q9P2W9 335 aaKnown RBP12.32□□□□□ -0.44
TRAF4-212ENST00000498540 PPP1R3CQ9UQK1 317 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 LRCH1Q9Y2L9 728 aa12.32□□□□□ -0.44
TRAF4-212ENST00000498540 DOCK11Q5JSL3 2073 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 FAM181BA6NEQ2 426 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 ABHD16AO95870 558 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 WNT2P09544 360 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 PPIAL4GP0DN37 164 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 IDH3AP50213 366 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 ERFP50548 548 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 MMP16P51512 607 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 CRYBA2P53672 197 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 ENDOGQ14249 297 aaKnown RBP12.31□□□□□ -0.44
TRAF4-212ENST00000498540 LAPTM4AQ15012 233 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 BRD3OSQ6XYD6 125 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-212ENST00000498540 SGTBQ96EQ0 304 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 OR2V2Q96R30 315 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 TXNIPQ9H3M7 391 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 TNFRSF19Q9NS68 423 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 NKIRAS1Q9NYS0 192 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 IL19Q9UHD0 177 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 IL20RAQ9UHF4 553 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms