RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ZNF774Q6NX45 483 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 PTCHD4Q6ZW05 846 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 ADCK1Q86TW2 530 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 ZNF101Q8IZC7 436 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 ARHGAP24Q8N264 748 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 SYNPRQ8TBG9 265 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 UBASH3BQ8TF42 649 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 RERGLQ9H628 205 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 VSX1Q9NZR4 365 aaPredicted RBP15.77■□□□□ 0.12
HOXD11-202ENST00000498438 TAAR3PQ9P1P4 343 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 TMCC3Q9ULS5 477 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 MALRD1Q5VYJ5 2156 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.76■□□□□ 0.11
HOXD11-202ENST00000498438 IGLV3-9A0A075B6K5 115 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 IGHV4-61A0A0C4DH41 118 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 TCRBV5S2A0A599 114 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 C12orf71A8MTZ7 269 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 LYNX1G3V0Z9 82 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 SLC16A7O60669 478 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 CRLF1O75462 422 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 PPP1R3DO95685 299 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 TXNDC12O95881 172 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 IGHV4-31P0DP07 118 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 LYNX1P0DP58 116 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 NAT2P11245 290 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 ZNF16P17020 682 aaPredicted RBP15.76■□□□□ 0.11
HOXD11-202ENST00000498438 GIFP27352 417 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 SELENOVP59797 346 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 ALDH16A1Q8IZ83 802 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 ZNF786Q8N393 782 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 ZNF540Q8NDQ6 660 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 OR1J1Q8NGS3 322 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 C11orf40Q8WZ69 217 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 OR52D1Q9H346 318 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 MUC13Q9H3R2 512 aa15.76■□□□□ 0.11
HOXD11-202ENST00000498438 A8MV72 311 aaPredicted RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 KHDRBS3O75525 346 aaKnown RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 APEHP13798 732 aaKnown RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 SLC6A6P31641 620 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 IFNGR2P38484 337 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 CDKN2AP42771 156 aaKnown RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 MAGEA2P43356 314 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 RFX4Q33E94 735 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 SPATA46Q5T0L3 261 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 OTPQ5XKR4 325 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 LCN8Q6JVE9 175 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 RFPL4BQ6ZWI9 263 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 SYT9Q86SS6 491 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 DHFR2Q86XF0 187 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 ERMAPQ96PL5 475 aaPredicted RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 NUAK2Q9H093 628 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 FAM53CQ9NYF3 392 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 EIF3KQ9UBQ5 218 aaKnown RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 COA3Q9Y2R0 106 aaPredicted RBP15.75■□□□□ 0.11
HOXD11-202ENST00000498438 LYVE1Q9Y5Y7 322 aa15.75■□□□□ 0.11
HOXD11-202ENST00000498438 KRT36O76013 467 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 NCR1O76036 304 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 HPXP02790 462 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 ZNF23P17027 643 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 GSSP48637 474 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 MS4A2Q01362 244 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 GLO1Q04760 184 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 SCRN3Q0VDG4 424 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 TRIM25Q14258 630 aaKnown RBP15.74■□□□□ 0.11
HOXD11-202ENST00000498438 ELFN2Q5R3F8 820 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 CYB5R2Q6BCY4 276 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 C1orf94Q6P1W5 598 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 PGBD2Q6P3X8 592 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 PRIMA1Q86XR5 153 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 GLB1L2Q8IW92 636 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 ABHD4Q8TB40 342 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 GNPDA2Q8TDQ7 276 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 SNX33Q8WV41 574 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 SAMD8Q96LT4 415 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 WACQ9BTA9 647 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 IFT27Q9BW83 186 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 SLCO1C1Q9NYB5 712 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 GPR160Q9UJ42 338 aa15.74■□□□□ 0.11
HOXD11-202ENST00000498438 PRPF19Q9UMS4 504 aaKnown RBP15.74■□□□□ 0.11
HOXD11-202ENST00000498438 TNFRSF11BO00300 401 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 DOK2O60496 412 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 MPZL1O95297 269 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 GZMKP49863 264 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 TSPAN31Q12999 210 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 AQP6Q13520 282 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 RIN1Q13671 783 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 LEG1Q6P5S2 330 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 UNQ6126/PRO20091Q6UXV3 157 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 ZNF620Q6ZNG0 422 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 JAZF1Q86VZ6 243 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 OR9Q2Q8NGE9 314 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 SLC25A40Q8TBP6 338 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 GTF3AQ92664 365 aaKnown RBP15.73■□□□□ 0.11
HOXD11-202ENST00000498438 CCDC124Q96CT7 223 aaKnown RBP15.73■□□□□ 0.11
HOXD11-202ENST00000498438 CLPTM1LQ96KA5 538 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 TSSK2Q96PF2 358 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 BTBD10Q9BSF8 475 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 MAGIXQ9H6Y5 334 aa15.73■□□□□ 0.11
HOXD11-202ENST00000498438 HINT3Q9NQE9 182 aaKnown RBP15.73■□□□□ 0.11
HOXD11-202ENST00000498438 NDRG4Q9ULP0 352 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms