RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 C10orf82Q8WW14 230 aa13.53□□□□□ -0.24
MUC1-220ENST00000498431 HIST1H2ACQ93077 130 aa13.53□□□□□ -0.24
MUC1-220ENST00000498431 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
MUC1-220ENST00000498431 GPA33Q99795 319 aa13.53□□□□□ -0.24
MUC1-220ENST00000498431 WNT5BQ9H1J7 359 aa13.53□□□□□ -0.24
MUC1-220ENST00000498431 PATZ1Q9HBE1 687 aaKnown RBP13.53□□□□□ -0.24
MUC1-220ENST00000498431 EIF3KQ9UBQ5 218 aaKnown RBP13.53□□□□□ -0.24
MUC1-220ENST00000498431 A0A1W2PRG6 482 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 EVPLLA8MZ36 301 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 SNX3O60493 162 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 CD247P20963 164 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 AQP2P41181 271 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 SLC6A9P48067 706 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 GDI2P50395 445 aaKnown RBP13.52□□□□□ -0.25
MUC1-220ENST00000498431 TNFAIP6P98066 277 aaPredicted RBP13.52□□□□□ -0.25
MUC1-220ENST00000498431 ZMYND11Q15326 602 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 SGCAQ16586 387 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 C11orf65Q8NCR3 313 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 MOSPD2Q8NHP6 518 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 PFN4Q8NHR9 129 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 NSMAFQ92636 917 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 HDAC2Q92769 488 aaKnown RBP13.52□□□□□ -0.25
MUC1-220ENST00000498431 SLC25A28Q96A46 364 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 CCT8L2Q96SF2 557 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 SLC19A3Q9BZV2 496 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 KCNN2Q9H2S1 579 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 RABEP2Q9H5N1 569 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 CYSLTR2Q9NS75 346 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 TMEM106BQ9NUM4 274 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 CORO2BQ9UQ03 480 aa13.52□□□□□ -0.25
MUC1-220ENST00000498431 POM121CA8CG34 1229 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 CENPBD1B2RD01 187 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 F5H0A9 414 aaPredicted RBP13.51□□□□□ -0.25
MUC1-220ENST00000498431 FAM107AO95990 144 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 OMGP23515 440 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 SRSF4Q08170 494 aaKnown RBP13.51□□□□□ -0.25
MUC1-220ENST00000498431 RUNDC3AQ59EK9 446 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 CLDN22Q8N7P3 220 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 TAMM41Q96BW9 452 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 MPP4Q96JB8 637 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 SIGLEC11Q96RL6 698 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 OR2H1Q9GZK4 316 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 PCDHAC1Q9H158 963 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 POFUT1Q9H488 388 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 INIPQ9NRY2 104 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 C20orf141Q9NUB4 165 aa13.51□□□□□ -0.25
MUC1-220ENST00000498431 MDFIC2A0A1B0GVS7 189 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 A8MXK9 166 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CLDN34H7C241 214 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 OR7A10O76100 309 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 GPANK1O95872 356 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 FUT1P19526 365 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CD80P33681 288 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 LIPAP38571 399 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CRYBA2P53672 197 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 MTPNP58546 118 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 BTG1P62324 171 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CD47Q08722 323 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 PSG7Q13046 419 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CDK5R2Q13319 367 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CYP51A1Q16850 503 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 AGKQ53H12 422 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 MTX3Q5HYI7 312 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 SLC25A47Q6Q0C1 308 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 Q6ZR03 302 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 LRRC28Q86X40 367 aaPredicted RBP13.5□□□□□ -0.25
MUC1-220ENST00000498431 NKAIN4Q8IVV8 208 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 KLHL36Q8N4N3 616 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 SPICQ8N5J4 248 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 ZNF283Q8N7M2 679 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 DIRC2Q96SL1 478 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 MRI1Q9BV20 369 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 MS4A7Q9GZW8 240 aaPredicted RBP13.5□□□□□ -0.25
MUC1-220ENST00000498431 SLITRK2Q9H156 845 aa13.5□□□□□ -0.25
MUC1-220ENST00000498431 CGGBP1Q9UFW8 167 aaPredicted RBP13.5□□□□□ -0.25
MUC1-220ENST00000498431 H3BSA7 217 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 TIMM8AO60220 97 aaPredicted RBP13.49□□□□□ -0.25
MUC1-220ENST00000498431 ICMTO60725 284 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 MT-ND1P03886 318 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 TSPAN19P0C672 248 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 LAP3P28838 519 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
MUC1-220ENST00000498431 PAX8Q06710 450 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 LAPTM4AQ15012 233 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 TMEM155Q4W5P6 130 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 FAM27BQ5VT28 67 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 ZNF774Q6NX45 483 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 OR52E2Q8NGJ4 325 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 TMEM255BQ8WV15 326 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 TMIGD2Q96BF3 282 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 NANOGQ9H9S0 305 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 SMURF2Q9HAU4 748 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 MRGBPQ9NV56 204 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms