RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 A0A1W2PPK0 400 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 A0A1W2PPQ1 181 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SHISA3A0PJX4 238 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 ZNF670-ZNF695F2Z2N8 137 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SLCO1B7G3V0H7 640 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 M0R036 132 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 VCYO14598 125 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 KERAO60938 352 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ALOX12BO75342 701 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TM7SF2O76062 418 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 POMCP01189 267 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ORM1P02763 201 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SERPINA7P05543 415 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RPL35AP18077 110 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 HLA-DPA1P20036 260 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NFYBP25208 207 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GTF2E2P29084 291 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 AKT2P31751 481 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 BMI1P35226 326 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CDH15P55291 814 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GPR85P60893 370 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SIRPAP78324 504 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 HSPA14Q0VDF9 509 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PPP1R1AQ13522 171 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ITIH4Q14624 930 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 EPHA7Q15375 998 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FASTKD1Q53R41 847 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 RASL11AQ6T310 242 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 Q6ZUG5 572 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 IKBIPQ70UQ0 350 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TRIM69Q86WT6 500 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CARM1Q86X55 608 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 BAGE3Q86Y29 109 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 BAGE2Q86Y30 109 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 AADATQ8N5Z0 425 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 OR2T35Q8NGX2 323 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NCOA7Q8NI08 942 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PRR11Q96HE9 360 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 TMEM59Q9BXS4 323 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 OR2J1Q9GZK6 312 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SRMSQ9H3Y6 488 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 WDR54Q9H977 334 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TNFRSF12AQ9NP84 129 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 OSER1Q9NX31 292 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 DTLQ9NZJ0 730 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RPS6KB2Q9UBS0 482 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CLEC2DQ9UHP7 191 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CES1P1Q9UKY3 287 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CACNG2Q9Y698 323 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 COMMD3-BMI1R4GMX3 469 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FLNAP21333 2647 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 IBTKQ9P2D0 1353 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 NPIPB13A6NJU9 1138 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NPIPB4C9JG80 1138 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 F2Z2F3 143 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 H0Y9J4 135 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SLC17A2O00624 439 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 MLNRO43193 412 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RNF13O43567 381 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PFKFB2O60825 505 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ZNF821O75541 412 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 PAHP00439 452 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 APCSP02743 223 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 DRD4P21917 467 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TUBG1P23258 451 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 VAMP1P23763 118 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 MTNR1AP48039 350 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CAPZA1P52907 286 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FBXW4P57775 412 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CLRN1P58418 232 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CSNK2BP67870 215 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TRIM29Q14134 588 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 P2RY14Q15391 338 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GPR19Q15760 415 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 UBAP2Q5T6F2 1119 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 ZNF660Q6AZW8 331 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 LCLAT1Q6UWP7 414 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CASP12Q6UXS9 341 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 LDHAL6AQ6ZMR3 332 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 Q6ZVH6 145 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GATAD2AQ86YP4 633 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TIGD4Q8IY51 512 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 OR10A6Q8NH74 314 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 LMO3Q8TAP4 145 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SLC2A14Q8TDB8 520 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PIK3R3Q92569 461 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NPIPB3Q92617 1050 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RGMAQ96B86 450 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 Q96M66 194 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GPA33Q99795 319 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 BARHL1Q9BZE3 327 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ULBP2Q9BZM5 246 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PRSS22Q9GZN4 317 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CSTL1Q9H114 145 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TPK1Q9H3S4 243 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD19PQ9H560 264 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NMNAT1Q9HAN9 279 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 LTB4R2Q9NPC1 389 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TBK1Q9UHD2 729 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms