RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	ZNF615	Q8N8J6	731 aa		3.23	□□□□□ -1.89
TRA2A-210	ENST00000497730	LINC00477	Q96M19	166 aa		3.23	□□□□□ -1.89
TRA2A-210	ENST00000497730	ZNF681	Q96N22	645 aa		3.23	□□□□□ -1.89
TRA2A-210	ENST00000497730	CENPK	Q9BS16	269 aa		3.23	□□□□□ -1.89
TRA2A-210	ENST00000497730	GPATCH2L	Q9NWQ4	482 aa		3.23	□□□□□ -1.89
TRA2A-210	ENST00000497730	USP47	Q96K76	1375 aa		3.23	□□□□□ -1.89
TRA2A-210	ENST00000497730	RAD51B	O15315	384 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	FOXH1	O75593	365 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	UBTFL6	P0CB48	400 aa	Predicted RBP	3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	OR5H8	P0DN80	308 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	CCNB1	P14635	433 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	F2R	P25116	425 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	ADARB1	P78563	741 aa	Known RBP	3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	PON2	Q15165	354 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	SNRNP35	Q16560	246 aa	Known RBP	3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	PPM1L	Q5SGD2	360 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	ZNF684	Q5T5D7	378 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	METTL21C	Q5VZV1	264 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	FBXW12	Q6X9E4	464 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	NTM-AS1	Q6ZSK4	140 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	WDR86	Q86TI4	376 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	RNF182	Q8N6D2	247 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	ZFP41	Q8N8Y5	198 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	ZNF382	Q96SR6	550 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	SCRT1	Q9BWW7	348 aa		3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	SAV1	Q9H4B6	383 aa	Predicted RBP	3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	UBE2Z	Q9H832	354 aa	Predicted RBP	3.22	□□□□□ -1.89
TRA2A-210	ENST00000497730	MAPK8IP3	Q9UPT6	1336 aa		3.21	□□□□□ -1.89
TRA2A-210	ENST00000497730	TMEM223	A0PJW6	202 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	XKRY2	A2RUG3	117 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	C7orf66	A4D0T2	115 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	COLCA2	A8K830	154 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	SGK1	O00141	431 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	IGHD	P01880	384 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	ACSM4	P0C7M7	580 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	CX3CR1	P49238	355 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	RND2	P52198	227 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	SMUG1	Q53HV7	270 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	XKR7	Q5GH72	579 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZNF880	Q6PDB4	577 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	FAM43B	Q6ZT52	329 aa	Predicted RBP	3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZNF461	Q8TAF7	563 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	OR51M1	Q9H341	326 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZDHHC4	Q9NPG8	344 aa		3.21	□□□□□ -1.9
TRA2A-210	ENST00000497730	IGLV1-50	A0A075B6I6	118 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SPRR5	A0A1B0GTR4	108 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SMCO3	A2RU48	225 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SERPINE3	A8MV23	424 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	NUPL2	O15504	423 aa	Known RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	CLOCK	O15516	846 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	RNF13	O43567	381 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SNX4	O95219	450 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	OR56A5	P0C7T3	313 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	WARS	P23381	471 aa	Known RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	DCK	P27707	260 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	TNNT2	P45379	298 aa	Predicted RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	CSNK1E	P49674	416 aa	Known RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	CDH6	P55285	790 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	LOXL1	Q08397	574 aa	Predicted RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SOHLH1	Q5JUK2	328 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SHISA6	Q6ZSJ9	500 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	CDH26	Q8IXH8	852 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	PRELID2	Q8N945	189 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	NTAN1	Q96AB6	310 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	NEURL3	Q96EH8	262 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	DUS3L	Q96G46	650 aa	Known RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	OR10C1	Q96KK4	312 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZNF578	Q96N58	590 aa	Predicted RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	NUP58	Q9BVL2	599 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	SPNS1	Q9H2V7	528 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	UXT	Q9UBK9	157 aa	Predicted RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	TRMT112	Q9UI30	125 aa	Known RBP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	IKBKG	Q9Y6K9	419 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	DOCK8	Q8NF50	2099 aa		3.2	□□□□□ -1.9
TRA2A-210	ENST00000497730	GOLGA8O	A6NCC3	632 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZNF716	A6NP11	495 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	GOLGA8N	F8WBI6	632 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	LSM1	O15116	133 aa	Known RBP	3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	WBP4	O75554	376 aa	Known RBP	3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	RBBP9	O75884	186 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	OR2J3	O76001	311 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZNF735	P0CB33	412 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	PBLD	P30039	288 aa	Predicted RBP	3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	GPX4	P36969	197 aa	Predicted RBP	3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	CDH17	Q12864	832 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	IRF4	Q15306	451 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	MRPL23	Q16540	153 aa	Known RBP	3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	COX19	Q49B96	90 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	C9orf135	Q5VTT2	229 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	CALHM1	Q8IU99	346 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	METTL13	Q8N6R0	699 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	COQ8A	Q8NI60	647 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	ZNF721	Q8TF20	911 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	DEDD2	Q8WXF8	326 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	RASD2	Q96D21	266 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	MICU1	Q9BPX6	476 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	RACGAP1	Q9H0H5	632 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	RFNG	Q9Y644	331 aa		3.19	□□□□□ -1.9
TRA2A-210	ENST00000497730	KCNE3	Q9Y6H6	103 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms