RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LRRC34Q8IZ02 419 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 PDIK1LQ8N165 341 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 KLHDC9Q8NEP7 349 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ITFG1Q8TB96 612 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MRAPQ8TCY5 172 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ADAMTS16Q8TE57 1224 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 OR8D1Q8WZ84 308 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 NABP1Q96AH0 204 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 CNRIP1Q96F85 164 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MS4A14Q96JA4 679 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF75AQ96N20 296 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 SERPINB12Q96P63 405 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MRPL45Q9BRJ2 306 aaKnown RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 TIMM29Q9BSF4 260 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF747Q9BV97 191 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 TM2D1Q9BX74 207 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ELOVL4Q9GZR5 314 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 NXF3Q9H4D5 531 aaKnown RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ARMC7Q9H6L4 198 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 CLN6Q9NWW5 311 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MAT2BQ9NZL9 334 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 TAAR2Q9P1P5 351 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 RSPH14Q9UHP6 348 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 CSNK1G3Q9Y6M4 447 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 RAD50Q92878 1312 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 NUP98P52948 1817 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 AK9Q5TCS8 1911 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 COL4A1P02462 1669 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 IGHV4-4A0A075B6R2 117 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 A0A1B0GTI1 187 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 A0A1B0GW55 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 A0A1B0GWB2 263 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 BCLAF3A2AJT9 711 aaKnown RBP4.97□□□□□ -1.61
BRCA1-224ENST00000497488 USP27XA6NNY8 438 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 B4DXG7 233 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 PRAC2D3DTV9 90 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 H7C0C1 242 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 M0QXV9 152 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DCTN6O00399 190 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 OR5F1O95221 314 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 OXTP01178 125 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 PRSS1P07477 247 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L2P0CJ85 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L3P0CJ86 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L4P0CJ87 422 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L5P0CJ88 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L6P0CJ89 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L7P0CJ90 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 PAX1P15863 534 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 CSRP3P50461 194 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 EFNA3P52797 238 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 TLE4Q04727 773 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 PUDPQ08623 228 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 C2orf80Q0P641 193 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 GGTLC2Q14390 218 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 C5orf64Q2M2E5 130 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 FAM173BQ6P4H8 233 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 TRIM40Q6P9F5 258 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4L9Q6RFH8 374 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-224ENST00000497488 ABHD13Q7L211 337 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 MTERF4Q7Z6M4 381 aaKnown RBP4.97□□□□□ -1.61
BRCA1-224ENST00000497488 MRGPRGQ86SM5 289 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 PIANPQ8IYJ0 282 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 STPG4Q8N801 248 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 OR6K2Q8NGY2 324 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 OR2G2Q8NGZ5 317 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 CRYGNQ8WXF5 182 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 CMTM7Q96FZ5 175 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 ITCHQ96J02 903 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 SORCS2Q96PQ0 1159 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF300Q96RE9 604 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-224ENST00000497488 TUBB1Q9H4B7 451 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF71Q9NQZ8 489 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-224ENST00000497488 MCUBQ9NWR8 336 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 DUX4Q9UBX2 424 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 ARFGEF1Q9Y6D6 1849 aa4.97□□□□□ -1.61
BRCA1-224ENST00000497488 ANKRD36CQ5JPF3 1778 aa4.96□□□□□ -1.61
BRCA1-224ENST00000497488 ARFGEF2Q9Y6D5 1785 aa4.96□□□□□ -1.61
BRCA1-224ENST00000497488 IBTKQ9P2D0 1353 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-224ENST00000497488 IGHV3-38A0A0C4DH36 116 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 PSMB11A5LHX3 300 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 LOC110117498-PIK3R3F6TDL0 507 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 H3BNX3 289 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 CLDN34H7C241 214 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 K7EN84 100 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 SOCS2O14508 198 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 AQP9O43315 295 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 ADAP1O75689 374 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 TDP2O95551 362 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 LSM8O95777 96 aaKnown RBP4.96□□□□□ -1.62
BRCA1-224ENST00000497488 IGHG1P01857 330 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 RHOCP08134 193 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 PSKH1P11801 424 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 PVRP15151 417 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 DNASE1L1P49184 302 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 VSNL1P62760 191 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 SLC35B1P78383 322 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 SSBP2P81877 361 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-224ENST00000497488 MRPS11P82912 194 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms