RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ERFP50548 548 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 NUDT6P53370 316 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 HSF2Q03933 536 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 KRTAP1-1Q07627 177 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 KCNMB1Q16558 191 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 CLEC12AQ5QGZ9 265 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 ZNF774Q6NX45 483 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 LEG1Q6P5S2 330 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 RASSF6Q6ZTQ3 369 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 SYT9Q86SS6 491 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 BIVMQ86UB2 503 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 OR6V1Q8N148 313 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 ZCCHC24Q8N2G6 241 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 PAPD5Q8NDF8 572 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 NPEPL1Q8NDH3 523 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 OR4K13Q8NH42 304 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 SNX18Q96RF0 628 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 KCNN2Q9H2S1 579 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 REEP1Q9H902 201 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 FZR1Q9UM11 496 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 SPEF1Q9Y4P9 236 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 TIMM10BQ9Y5J6 103 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 NIPBLQ6KC79 2804 aaeCLIP13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 IQCMA0A1B0GVH7 501 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 OR6C68A6NDL8 312 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 RNF223E7ERA6 249 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 IDH3BO43837 385 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 PTHP01270 115 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 BMP4P12644 408 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 EVX1P49640 407 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 UCP2P55851 309 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 GALK2Q01415 458 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 PLP2Q04941 152 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 TBC1D28Q2M2D7 210 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 TMEM255AQ5JRV8 349 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 CD300LDQ6UXZ3 194 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 ZBTB46Q86UZ6 589 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 GLB1L2Q8IW92 636 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 ZNF101Q8IZC7 436 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 MAPK1IP1LQ8NDC0 245 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 SDR9C7Q8NEX9 313 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 C11orf40Q8WZ69 217 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 FN3KQ9H479 309 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 CDH20Q9HBT6 801 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 B9D1Q9UPM9 204 aa13.85□□□□□ -0.19
DNMT3A-215ENST00000496570 IGLV3-9A0A075B6K5 115 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 C12orf71A8MTZ7 269 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 ICMTO60725 284 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 FKBP6O75344 327 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 STAMBPO95630 424 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 LY6G6DO95868 133 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 APLNRP35414 380 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 PCBD1P61457 104 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 RPS23P62266 143 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 LSM6P62312 80 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 GK3PQ14409 553 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 MEP1BQ16820 701 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 SLC35F1Q5T1Q4 408 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 SPATA24Q86W54 205 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 HS3ST5Q8IZT8 346 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 OR10G2Q8NGC3 310 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 OR1J2Q8NGS2 313 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 OR4Q3Q8NH05 313 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 C10orf105Q8TEF2 133 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 SYT3Q9BQG1 590 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 WACQ9BTA9 647 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 REG4Q9BYZ8 158 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 RACGAP1Q9H0H5 632 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 OR51B6Q9H340 312 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 RERGLQ9H628 205 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 NTN4Q9HB63 628 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 RPRD1BQ9NQG5 326 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 REV1Q9UBZ9 1251 aa13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-215ENST00000496570 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 ARRDC5A6NEK1 342 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 SOX14O95416 240 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 CLPTM1O96005 669 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 TFP02787 698 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 ZNF250P15622 560 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 CRABP1P29762 137 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 GUCA1AP43080 201 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 HIST1H3AP68431 136 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 MAD2L1BPQ15013 274 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 CCDC92Q53HC0 331 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 HIST2H3PS2Q5TEC6 136 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 RPL13AP3Q6NVV1 102 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 HIST2H3AQ71DI3 136 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 VASH1Q7L8A9 365 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 JAZF1Q86VZ6 243 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 LNX2Q8N448 690 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 SLC26A10Q8NG04 563 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 OR52E2Q8NGJ4 325 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 GIPC3Q8TF64 312 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 ZNRF4Q8WWF5 429 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 FEVQ99581 238 aa13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 VRK1Q99986 396 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-215ENST00000496570 LRMDAQ9H2I8 198 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms