RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RASD2Q96D21 266 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 CMTM5Q96DZ9 223 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 C7orf34Q96L11 122 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 Q96M85 177 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 ELAC2Q9BQ52 826 aaKnown RBP12.16□□□□□ -0.46
VTI1A-209ENST00000496445 REPIN1Q9BWE0 567 aaKnown RBP12.16□□□□□ -0.46
VTI1A-209ENST00000496445 OR2J1Q9GZK6 312 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 NDUFAF4Q9P032 175 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-209ENST00000496445 GPR160Q9UJ42 338 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 RPS6KA6Q9UK32 745 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 CACNG2Q9Y698 323 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 TRBV4-1A0A0J9YWV2 114 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 A0A1W2PRQ8 180 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 NDUFAB1O14561 156 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 IMPA2O14732 288 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 DIRAS1O95057 198 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 NGFP01138 241 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 TFP02787 698 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 H1F0P07305 194 aaKnown RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 GAAP10253 952 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 CTLA4P16410 223 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 MSR1P21757 451 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 PRDX6P30041 224 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 OMPP47874 163 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 MMP15P51511 669 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 FXYD6P3P58550 94 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 PCBD1P61457 104 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 LMO4P61968 165 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 DGCR6Q14129 220 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 SEC23BQ15437 767 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 TSTQ16762 297 aaKnown RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 AVPI1Q5T686 147 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 MBNL2Q5VZF2 373 aaKnown RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 RINLQ6ZS11 566 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 CYP4Z1Q86W10 505 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 ABHD4Q8TB40 342 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 KLF14Q8TD94 323 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF570Q96NI8 536 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 FUZQ9BT04 418 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 SPAG4Q9NPE6 437 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 DCAF13Q9NV06 445 aaKnown RBP12.15□□□□□ -0.46
VTI1A-209ENST00000496445 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 GRHPRQ9UBQ7 328 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 SIGLEC7Q9Y286 467 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 TMEM5Q9Y2B1 443 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 TIMM10BQ9Y5J6 103 aa12.15□□□□□ -0.46
VTI1A-209ENST00000496445 TEX13CA0A0J9YWL9 993 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 PRSS37A4D1T9 235 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 B4DSR2 109 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 PTP4A3O75365 173 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 IGHV1-46P01743 117 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 SEMG1P04279 462 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 DRD4P21917 467 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 CRYBB2P43320 205 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 ZNF81P51508 661 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 PPP1CBP62140 327 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 HNRNPA0Q13151 305 aaKnown RBP12.14□□□□□ -0.47
VTI1A-209ENST00000496445 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
VTI1A-209ENST00000496445 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 OTPQ5XKR4 325 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 GLYATQ6IB77 296 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 USP51Q70EK9 711 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 SYT9Q86SS6 491 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 GLCCI1Q86VQ1 547 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 RNF148Q8N7C7 305 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 RSRC1Q96IZ7 334 aaKnown RBP12.14□□□□□ -0.47
VTI1A-209ENST00000496445 DHRS1Q96LJ7 313 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 GPA33Q99795 319 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 LPAR2Q9HBW0 351 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
VTI1A-209ENST00000496445 IL20RAQ9UHF4 553 aa12.14□□□□□ -0.47
VTI1A-209ENST00000496445 TENM1Q9UKZ4 2725 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 IGHV1-69-2A0A0G2JMI3 117 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 C12orf71A8MTZ7 269 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 XKRYO14609 159 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 SPRY3O43610 288 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 SNX3O60493 162 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 DOK2O60496 412 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 NDUFB2O95178 105 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 RHCEP18577 417 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 GCH1P30793 250 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 FAM209AQ5JX71 171 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 ALDH16A1Q8IZ83 802 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 TMEM186Q96B77 213 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 C4orf45Q96LM5 186 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 SYT4Q9H2B2 425 aa12.13□□□□□ -0.47
VTI1A-209ENST00000496445 NRIP3Q9NQ35 241 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms