RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 DGCR6Q14129 220 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 KRT72Q14CN4 511 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 TSEN54Q7Z6J9 526 aaKnown RBP10.88□□□□□ -0.67
PTPRF-214ENST00000496043 CPLX4Q7Z7G2 160 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 PHC2Q8IXK0 858 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 CLDND2Q8NHS1 167 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 SLC7A13Q8TCU3 470 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 MARS2Q96GW9 593 aaKnown RBP10.88□□□□□ -0.67
PTPRF-214ENST00000496043 Q96M85 177 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 RACGAP1Q9H0H5 632 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 SPAG4Q9NPE6 437 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 POLE4Q9NR33 117 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 DCAF13Q9NV06 445 aaKnown RBP10.88□□□□□ -0.67
PTPRF-214ENST00000496043 NDUFAF4Q9P032 175 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 SAMD4AQ9UPU9 718 aaKnown RBP10.88□□□□□ -0.67
PTPRF-214ENST00000496043 DNHD1Q96M86 4753 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 IGHV1-69-2A0A0G2JMI3 117 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 PRSS37A4D1T9 235 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 H7C1C5 153 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 CDC14BO60729 498 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 RP2O75695 350 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 NDUFB2O95178 105 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 SCG5P05408 212 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 ANPEPP15144 967 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 SRP14P37108 136 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 LIPAP38571 399 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 PPP1CBP62140 327 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 LCN6P62502 163 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 ENDOGQ14249 297 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 TSTQ16762 297 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 SPATA46Q5T0L3 261 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 LIPNQ5VXI9 398 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 MBNL2Q5VZF2 373 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 GPR139Q6DWJ6 353 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 ZNF774Q6NX45 483 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 GLCCI1Q86VQ1 547 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 ZNF101Q8IZC7 436 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 KLF14Q8TD94 323 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 FAM46AQ96IP4 442 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 C4orf45Q96LM5 186 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 OR2J1Q9GZK6 312 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 FAM107BQ9H098 131 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 NSRP1Q9H0G5 558 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 NARFLQ9H6Q4 476 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 GORASP2Q9H8Y8 452 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 KRCC1Q9NPI7 259 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 CYSLTR2Q9NS75 346 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 TREM2Q9NZC2 230 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 NDRG4Q9ULP0 352 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 AURKCQ9UQB9 309 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 SIGLEC7Q9Y286 467 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 ADAM18Q9Y3Q7 739 aa10.87□□□□□ -0.67
PTPRF-214ENST00000496043 FBN1P35555 2871 aaKnown RBP10.87□□□□□ -0.67
PTPRF-214ENST00000496043 PLSCR5A0PG75 271 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 SPRY3O43610 288 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 SNX3O60493 162 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 KHDRBS3O75525 346 aaKnown RBP10.86□□□□□ -0.67
PTPRF-214ENST00000496043 NGFP01138 241 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 COX5BP10606 129 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 ZNF26P17031 533 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-214ENST00000496043 ITGA2P17301 1181 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 TUBG1P23258 451 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 MPV17P39210 176 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 SMIM11AP58511 58 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 LMO4P61968 165 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 GLO1Q04760 184 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 HFEQ30201 348 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 FGD3Q5JSP0 725 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 FAM209AQ5JX71 171 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 USP51Q70EK9 711 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 PYURFQ96I23 114 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 C7orf34Q96L11 122 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 EGLN1Q9GZT9 426 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 EMC7Q9NPA0 242 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 NRIP3Q9NQ35 241 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 TUBG2Q9NRH3 451 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 KLHL21Q9UJP4 597 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
PTPRF-214ENST00000496043 TEX13CA0A0J9YWL9 993 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 UNC119BA6NIH7 251 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 H3BSA7 217 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 WNT9BO14905 357 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 SLC16A7O60669 478 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 ICMTO60725 284 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 GAAP10253 952 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 SDHAP31040 664 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 OMPP47874 163 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 MMP15P51511 669 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 MVKQ03426 396 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 SCRN3Q0VDG4 424 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 MESTQ5EB52 335 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 DPY19L2P2Q6ZN68 376 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 ZER1Q7Z7L7 766 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 RNF148Q8N7C7 305 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 OR52J3Q8NH60 311 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms