RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SLC6A7Q99884 636 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 ZDHHC8Q9ULC8 765 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 A4GNTQ9UNA3 340 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 TIMM10BQ9Y5J6 103 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 ISPDA4D126 451 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 BBIP1A8MTZ0 92 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 KDELR2P33947 212 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 PCBD1P61457 104 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 FAM205BPQ63HN1 556 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 ZNF774Q6NX45 483 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 IGFN1Q86VF2 1251 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 C3orf56Q8N813 242 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 LRRC75AQ8NAA5 344 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 GEMIN6Q8WXD5 167 aaKnown RBP18.7■□□□□ 0.58
HDDC3-203ENST00000494993 ZMYND19Q96E35 227 aaPredicted RBP18.7■□□□□ 0.58
HDDC3-203ENST00000494993 TPD52L3Q96J77 140 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 DIRC2Q96SL1 478 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 C7orf69Q9H7B7 122 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 ELOVL3Q9HB03 270 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 KLHL21Q9UJP4 597 aa18.7■□□□□ 0.58
HDDC3-203ENST00000494993 FAM220BPB1ANY3 271 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 FSHBP01225 129 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 CD55P08174 381 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 GUCA1AP43080 201 aaPredicted RBP18.69■□□□□ 0.58
HDDC3-203ENST00000494993 ARHGDIAP52565 204 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 LCN2P80188 198 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 ENDOGQ14249 297 aaKnown RBP18.69■□□□□ 0.58
HDDC3-203ENST00000494993 SPRNQ5BIV9 151 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 ZMAT1Q5H9K5 638 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 BPIFB2Q8N4F0 458 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 C4orf45Q96LM5 186 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 MSL2Q9HCI7 577 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 MRGBPQ9NV56 204 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 UBAP1Q9NZ09 502 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 OPN4Q9UHM6 478 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 DOCK11Q5JSL3 2073 aa18.69■□□□□ 0.58
HDDC3-203ENST00000494993 A0A1W2PPL8 197 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 A6NIZ1 184 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 SPRY1O43609 319 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-203ENST00000494993 MSR1P21757 451 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 IFNA8P32881 189 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 RAP1BP61224 184 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 RAP1AP62834 184 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 KLF10Q13118 480 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 SYT9Q86SS6 491 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 MICU2Q8IYU8 434 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 ST7LQ8TDW4 575 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 ESM1Q9NQ30 184 aa18.68■□□□□ 0.58
HDDC3-203ENST00000494993 TRAV27A0A087WT01 109 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 TIMM8AO60220 97 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-203ENST00000494993 PRSS23O95084 383 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 FUT4P22083 530 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 SELENOWP63302 87 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 TNFAIP6P98066 277 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-203ENST00000494993 FHL1Q13642 323 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 MAPRE2Q15555 327 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 MTX3Q5HYI7 312 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 ARL9Q6T311 187 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 NRMQ8IXM6 262 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 ZDHHC22Q8N966 263 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 OR2T12Q8NG77 320 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 OR51A7Q8NH64 312 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 POLE4Q9NR33 117 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 MAN2C1Q9NTJ4 1040 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 DCAF16Q9NXF7 216 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 NDRG4Q9ULP0 352 aaKnown RBP18.67■□□□□ 0.58
HDDC3-203ENST00000494993 NPTNQ9Y639 398 aa18.67■□□□□ 0.58
HDDC3-203ENST00000494993 C12orf71A8MTZ7 269 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 FOXH1O75593 365 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 ABHD16AO95870 558 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 IGHV2-70P01814 119 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 EGR1P18146 543 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 PSG7Q13046 419 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 HNRNPA0Q13151 305 aaKnown RBP18.66■□□□□ 0.58
HDDC3-203ENST00000494993 CDK5R2Q13319 367 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 ANKDD1AQ495B1 522 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 HDXQ7Z353 690 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 ZER1Q7Z7L7 766 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 OAFQ86UD1 273 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 TREML1Q86YW5 311 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 OFCC1Q8IZS5 231 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 PCYOX1LQ8NBM8 494 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 SAR1AQ9NR31 198 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 GID8Q9NWU2 228 aa18.66■□□□□ 0.58
HDDC3-203ENST00000494993 PPIAL4EA0A075B759 164 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 PPIAL4CA0A0B4J2A2 164 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 PPIAL4DF5H284 164 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 SCG5P05408 212 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 PPIAL4FP0DN26 164 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 COX5BP10606 129 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 FPR2P25090 351 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 ZFP36P26651 326 aaKnown RBP18.65■□□□□ 0.58
HDDC3-203ENST00000494993 YAP1P46937 504 aaKnown RBP18.65■□□□□ 0.58
HDDC3-203ENST00000494993 PRKCDQ05655 676 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 TRAM2Q15035 370 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 NPEPL1Q8NDH3 523 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 SGMS2Q8NHU3 365 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 C22orf15Q8WYQ4 148 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 LZICQ8WZA0 190 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 WACQ9BTA9 647 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms