RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FOXL2NBQ6ZUU3 175 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 GCDHQ92947 438 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-208ENST00000494780 KLHL21Q9UJP4 597 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 ZDHHC8Q9ULC8 765 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 A4GNTQ9UNA3 340 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 FAM220BPB1ANY3 271 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 CD55P08174 381 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 ARHGDIAP52565 204 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 CTXN1P60606 82 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 MAPRE2Q15555 327 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 ARL9Q6T311 187 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 HDXQ7Z353 690 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 SYT9Q86SS6 491 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 CLDN22Q8N7P3 220 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 LRRC75AQ8NAA5 344 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 ZMYND19Q96E35 227 aaPredicted RBP19.69■□□□□ 0.74
COL27A1-208ENST00000494780 C4orf45Q96LM5 186 aa19.69■□□□□ 0.74
COL27A1-208ENST00000494780 ISPDA4D126 451 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 A6NIZ1 184 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 NGFP01138 241 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 ADRA2CP18825 462 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 RAP1BP61224 184 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 RAP1AP62834 184 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 SELENOWP63302 87 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 KLF10Q13118 480 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 ANKDD1AQ495B1 522 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 ZNF774Q6NX45 483 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 ZER1Q7Z7L7 766 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 TREML1Q86YW5 311 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 C3orf56Q8N813 242 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 TPD52L3Q96J77 140 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 SLC6A7Q99884 636 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 WACQ9BTA9 647 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 C7orf69Q9H7B7 122 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 VIPAS39Q9H9C1 493 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 GID8Q9NWU2 228 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 NDRG4Q9ULP0 352 aaKnown RBP19.68■□□□□ 0.74
COL27A1-208ENST00000494780 WNK2Q9Y3S1 2297 aa19.68■□□□□ 0.74
COL27A1-208ENST00000494780 A0A1W2PPL8 197 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 C12orf71A8MTZ7 269 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 MSR1P21757 451 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 ENDOGQ14249 297 aaKnown RBP19.67■□□□□ 0.74
COL27A1-208ENST00000494780 MTX3Q5HYI7 312 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 IGFN1Q86VF2 1251 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 BPIFB2Q8N4F0 458 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 PCYOX1LQ8NBM8 494 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 OR2T12Q8NG77 320 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 ST7LQ8TDW4 575 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 DYSFO75923 2080 aa19.67■□□□□ 0.74
COL27A1-208ENST00000494780 PPIAL4EA0A075B759 164 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 PPIAL4CA0A0B4J2A2 164 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 PPIAL4DF5H284 164 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 FSHBP01225 129 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 PPIAL4FP0DN26 164 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 NRMQ8IXM6 262 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 OFCC1Q8IZS5 231 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 OR51A7Q8NH64 312 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 GEMIN6Q8WXD5 167 aaKnown RBP19.66■□□□□ 0.74
COL27A1-208ENST00000494780 LZICQ8WZA0 190 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 MSL2Q9HCI7 577 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 SAR1AQ9NR31 198 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 UBAP1Q9NZ09 502 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 OPN4Q9UHM6 478 aa19.66■□□□□ 0.74
COL27A1-208ENST00000494780 TANC2Q9HCD6 1990 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TRAV27A0A087WT01 109 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 ELOVL7A1L3X0 281 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TIMM8AO60220 97 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-208ENST00000494780 FOXH1O75593 365 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TROVE2P10155 538 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL27A1-208ENST00000494780 COX5BP10606 129 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TUBG1P23258 451 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 LCN2P80188 198 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TNFAIP6P98066 277 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-208ENST00000494780 PRKCDQ05655 676 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 CDK5R2Q13319 367 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 FHL1Q13642 323 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TRAM2Q15035 370 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 SPRNQ5BIV9 151 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 ZNF771Q7L3S4 317 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-208ENST00000494780 OAFQ86UD1 273 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 MICU2Q8IYU8 434 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 NPEPL1Q8NDH3 523 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 FNDC11Q9BVV2 318 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 POLE4Q9NR33 117 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TUBG2Q9NRH3 451 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 MAN2C1Q9NTJ4 1040 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 TBCCD1Q9NVR7 557 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 NPTNQ9Y639 398 aa19.65■□□□□ 0.74
COL27A1-208ENST00000494780 LOC100653049A0A140TA62 436 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 EFCAB9A8MZ26 197 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 SPRY1O43609 319 aaPredicted RBP19.64■□□□□ 0.73
COL27A1-208ENST00000494780 KRT34O76011 436 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 PRSS23O95084 383 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 GSTM3P21266 225 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 FPR2P25090 351 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 SLC9A3P48764 834 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 PSG7Q13046 419 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 RNF113BQ8IZP6 322 aaKnown RBP19.64■□□□□ 0.73
COL27A1-208ENST00000494780 SGMS2Q8NHU3 365 aa19.64■□□□□ 0.73
COL27A1-208ENST00000494780 ABHD16AO95870 558 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms