RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PRTN3P24158 256 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 IFNA8P32881 189 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 RBM34P42696 430 aaKnown RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 OR1E2P47887 323 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 HTR5AP47898 357 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 PCBD1P61457 104 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 LCN6P62502 163 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 DEFA6Q01524 100 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 ZNF154Q13106 437 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 PIN1Q13526 163 aaPredicted RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 HIST3H3Q16695 136 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 LRRC23Q53EV4 343 aaPredicted RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 SPRNQ5BIV9 151 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 TMEM255AQ5JRV8 349 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 C10orf128Q5T292 105 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 MBNL2Q5VZF2 373 aaKnown RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 ZER1Q7Z7L7 766 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 JAZF1Q86VZ6 243 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 BCL6BQ8N143 479 aaPredicted RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 TAF15Q92804 592 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBR4-216ENST00000494503 POP5Q969H6 163 aaKnown RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 NABP1Q96AH0 204 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 TPD52L3Q96J77 140 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 C4orf45Q96LM5 186 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 GPA33Q99795 319 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 ECSITQ9BQ95 431 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 PRSS27Q9BQR3 290 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 MRPL13Q9BYD1 178 aaKnown RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 WNT5BQ9H1J7 359 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 RERGLQ9H628 205 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 KAT8Q9H7Z6 458 aaKnown RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 CGGBP1Q9UFW8 167 aaPredicted RBP8.14□□□□□ -1.11
UBR4-216ENST00000494503 RIMS3Q9UJD0 308 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 BAG5Q9UL15 447 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 PPP1R3CQ9UQK1 317 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 UGT2A1Q9Y4X1 527 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 TIMM10BQ9Y5J6 103 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 PKD1L1Q8TDX9 2849 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 A0A0G2JND7 137 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 IGHV3-64DA0A0J9YX35 117 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 C12orf71A8MTZ7 269 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 CENPBD1B2RD01 187 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 MGRN1O60291 552 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 DOK2O60496 412 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 ZNF205O95201 554 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 OR5F1O95221 314 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 RPS2P15880 293 aaKnown RBP8.13□□□□□ -1.11
UBR4-216ENST00000494503 MSR1P21757 451 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 OMGP23515 440 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 RPL4P36578 427 aaKnown RBP8.13□□□□□ -1.11
UBR4-216ENST00000494503 CTXN1P60606 82 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 RPL27P61353 136 aaKnown RBP8.13□□□□□ -1.11
UBR4-216ENST00000494503 BTG1P62324 171 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 CYLC2Q14093 348 aaPredicted RBP8.13□□□□□ -1.11
UBR4-216ENST00000494503 VMACQ2NL98 169 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 MIDNQ504T8 468 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 PRR31Q5SQ13 230 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 ARMC4Q5T2S8 1044 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 BTNL3Q6UXE8 466 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 SPATC1Q76KD6 591 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 OR5AS1Q8N127 324 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 ATG16L2Q8NAA4 619 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 DEFB108BQ8NET1 73 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 OR52E2Q8NGJ4 325 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 OR51A7Q8NH64 312 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 ITLN1Q8WWA0 313 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 DVL3Q92997 716 aaPredicted RBP8.13□□□□□ -1.11
UBR4-216ENST00000494503 ZNF426Q9BUY5 554 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 PCDHAC1Q9H158 963 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 TXNIPQ9H3M7 391 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 SMURF2Q9HAU4 748 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 EMC7Q9NPA0 242 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 PLEK2Q9NYT0 353 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 NDRG4Q9ULP0 352 aaKnown RBP8.13□□□□□ -1.11
UBR4-216ENST00000494503 GMEB1Q9Y692 573 aa8.13□□□□□ -1.11
UBR4-216ENST00000494503 TRAV27A0A087WT01 109 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 TRAV40A0A0B4J280 105 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 TRAPPC2LH3BP13 241 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 XKRYO14609 159 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 SURF4O15260 269 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 IFNA14P01570 189 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 IGHV2-70P01814 119 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 CST2P09228 141 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 YAP1P46937 504 aaKnown RBP8.12□□□□□ -1.11
UBR4-216ENST00000494503 MTNR1AP48039 350 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 CENPAP49450 140 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 PSG7Q13046 419 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 ZMYND11Q15326 602 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 RABL3Q5HYI8 236 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 FAM27BQ5VT28 67 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 OTPQ5XKR4 325 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 LEG1Q6P5S2 330 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 SLC25A47Q6Q0C1 308 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 DOK3Q7L591 496 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.12□□□□□ -1.11
UBR4-216ENST00000494503 C1orf174Q8IYL3 243 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 PARP8Q8N3A8 854 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 NPEPL1Q8NDH3 523 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms