RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CASP12Q6UXS9 341 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 C12orf54Q6X4T0 127 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ZCCHC23Q6ZST2 131 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 EIF3MQ7L2H7 374 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 SSX8Q7RTT4 187 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PATL1Q86TB9 770 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM234Q8WY98 164 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 OR5P2Q8WZ92 322 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ST8SIA1Q92185 356 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 RAB8BQ92930 207 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ERGIC1Q969X5 290 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 SLC25A28Q96A46 364 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 MTERF3Q96E29 417 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ZHX1-C8orf76Q96EF9 292 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 AURKBQ96GD4 344 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 FCRL1Q96LA6 429 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 C3orf30Q96M34 536 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CCDC106Q9BWC9 280 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 BPESC1Q9GZL8 116 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 NMUR2Q9GZQ4 415 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 SLC17A5Q9NRA2 495 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CYSLTR2Q9NS75 346 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ACER3Q9NUN7 267 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PSMC3IPQ9P2W1 217 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CHRNA9Q9UGM1 479 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CMAHPQ9Y471 501 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ARHGAP32A7KAX9 2087 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM72A0PK05 275 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 SMIM23A6NLE4 172 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM114B3SHH9 223 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 H3BQF6 201 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 NDUFS8O00217 210 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 COPEO14579 308 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 KCNAB3O43448 404 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 SPRY1O43609 319 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-219ENST00000494323 GLRA3O75311 464 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 KRT33AO76009 404 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 AKR7A3O95154 331 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 VENTXO95231 258 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 STAMBPO95630 424 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 CPSF4O95639 269 aaKnown RBP4.43□□□□□ -1.7
PTCD3-219ENST00000494323 PMS2P2O95744 297 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 LGI1O95970 557 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 C1QCP02747 245 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 CHRNGP07510 517 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 FGF4P08620 206 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ABHD2P08910 425 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 FGF2P09038 288 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 OR12D1P0DN82 309 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 DAOP14920 347 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF23P17027 643 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM11P17152 192 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 SOAT1P35610 550 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 HPCAL1P37235 193 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF81P51508 661 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 SELENOVP59797 346 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 NAA20P61599 178 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 SNRPD2P62316 118 aaKnown RBP4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TUBA1BP68363 451 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TGFBR3Q03167 851 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TRIP10Q15642 601 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ARHGAP11BQ3KRB8 267 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 CCDC153Q494R4 210 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ATP6AP1LQ52LC2 224 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 C6orf136Q5SQH8 315 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 C1QTNF12Q5T7M4 302 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 OR4F3Q6IEY1 312 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 COLCA1Q6ZS62 124 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TUBA1AQ71U36 451 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TRMT10CQ7L0Y3 403 aaKnown RBP4.43□□□□□ -1.7
PTCD3-219ENST00000494323 AAED1Q7RTV5 226 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 C16orf62Q7Z3J2 963 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 C1QL2Q7Z5L3 287 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 CLECL1Q8IZS7 167 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 C4orf33Q8N1A6 199 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM99Q8N816 258 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 NRACQ8N912 160 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ZIC4Q8N9L1 334 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF540Q8NDQ6 660 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 PSMA8Q8TAA3 256 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 PIGXQ8TBF5 258 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TWIST2Q8WVJ9 160 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF385AQ96PM9 386 aaKnown RBP4.43□□□□□ -1.7
PTCD3-219ENST00000494323 KCNN2Q9H2S1 579 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 OR51I1Q9H343 314 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 HRH4Q9H3N8 390 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 KRCC1Q9NPI7 259 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-219ENST00000494323 CA10Q9NS85 328 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM181Q9P2C4 612 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 MALT1Q9UDY8 824 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TRAPPC4Q9Y296 219 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 AMDHD2Q9Y303 409 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMED5Q9Y3A6 229 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 HDGFL3Q9Y3E1 203 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 FLVCR1Q9Y5Y0 555 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 FKBP7Q9Y680 259 aa4.43□□□□□ -1.7
PTCD3-219ENST00000494323 TMED7-TICAM2A0A0A6YYA0 188 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms